sbg / VBT-TrioAnalysisLinks
☆13Updated 7 years ago
Alternatives and similar repositories for VBT-TrioAnalysis
Users that are interested in VBT-TrioAnalysis are comparing it to the libraries listed below
Sorting:
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Updated 5 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 4 years ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated 2 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Updated 2 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 5 months ago
- Evaluation of phasing performance☆23Updated 7 years ago
- ☆23Updated last month
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 weeks ago
- Sample Contamination Estimate from VCF☆20Updated last year
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- ☆35Updated 4 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- Location of public benchmarking; primarily final results☆18Updated 11 months ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- ☆20Updated 2 years ago
- ☆12Updated 4 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- Immuological gene typing and annotation for genome assembly☆38Updated 10 months ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Updated last year
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- ☆33Updated 3 years ago
- CAVA (Clinical Annotation of VAriants)☆14Updated 7 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Haplotype-based somatic genome simulator☆10Updated 8 years ago