mancusolab / FactorGoLinks
Software to infer latent pleiotropic components from GWAS summary data
☆16Updated 11 months ago
Alternatives and similar repositories for FactorGo
Users that are interested in FactorGo are comparing it to the libraries listed below
Sorting:
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- ☆19Updated 5 months ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 6 months ago
- Workflow for performing cistrome-wide associations studies☆11Updated 3 years ago
- ☆22Updated 3 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- ☆21Updated 5 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated this week
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Updated 5 months ago
- GENI plots to visualise results from genome-wide association studies☆31Updated last year
- ☆20Updated 3 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆23Updated 4 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated last year
- GWAS genetics Fine-mapping method☆26Updated last year
- Mediated Expression Score Regression (MESC)☆27Updated 2 months ago
- Regional association plots☆24Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Updated 5 months ago
- ☆21Updated last year
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- Cross-population analysis using GWAS summary statistics☆18Updated last year
- ☆35Updated 2 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 6 months ago
- MR-link-2: pleiotropy robust cis MR☆21Updated 5 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆38Updated last year