KangchengHou / admix-kit
Toolkit for analyzing genetics data from admixed populations
☆22Updated 9 months ago
Related projects ⓘ
Alternatives and complementary repositories for admix-kit
- Tool for GWAS summary-level data analysis☆26Updated 4 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆17Updated last month
- Cross-population fine-mapping☆27Updated 3 weeks ago
- Manhattan++☆27Updated 9 months ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated 2 weeks ago
- Software for estimating correlation of trait effect sizes across populations☆40Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆13Updated 2 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Updated 3 weeks ago
- ☆32Updated last year
- genetic correlation between phenotypes in the UK biobank☆13Updated 9 months ago
- Colocalization analysis of genetic association signals☆49Updated last week
- ☆21Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Primo☆16Updated 3 years ago
- Statistical fine-mapping pipeline in FinnGen☆26Updated last week
- ☆19Updated last month
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆28Updated 2 years ago
- Estimate genetic correlation using predicted expression☆20Updated 6 years ago
- A Fine-Mapping pipeline☆18Updated 5 years ago
- Network representation of LDSC results☆26Updated 2 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 8 years ago
- A tool to plot significant regions of GWAS☆29Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆17Updated 2 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆21Updated last year
- ☆20Updated 2 weeks ago
- Statistical tools for Quantitative Genetic Analyses☆34Updated this week
- Sequence kernel association test (SKAT)☆42Updated last year
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆45Updated 3 weeks ago