KangchengHou / admix-kitLinks
Toolkit for analyzing genetics data from admixed populations
☆30Updated 10 months ago
Alternatives and similar repositories for admix-kit
Users that are interested in admix-kit are comparing it to the libraries listed below
Sorting:
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆27Updated last year
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Updated 4 months ago
- Cross-population fine-mapping☆41Updated last year
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Quality control steps for GWAS☆26Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- ☆21Updated 2 years ago
- A collection of commonly used resources for complex trait genetics.☆35Updated 2 months ago
- The cattle Genotype-Tissue Expression atlas v1☆28Updated 2 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆42Updated last year
- ☆23Updated this week
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Updated last week
- ☆27Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20Updated 7 months ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated last month
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 10 months ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 3 months ago
- Software for estimating correlation of trait effect sizes across populations☆53Updated 7 months ago
- Pan-transcriptomic phenotyping☆18Updated 2 months ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆34Updated last year
- GWAS genetics Fine-mapping method☆16Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆44Updated last year
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- ☆20Updated 2 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated 2 years ago
- qsub command for serveral cluster engine☆14Updated 11 months ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Updated 10 months ago