Teichlab / limbcellatlasLinks
This repository contains codes used for the human fetal limb cell atlas.
☆16Updated 6 months ago
Alternatives and similar repositories for limbcellatlas
Users that are interested in limbcellatlas are comparing it to the libraries listed below
Sorting:
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated last month
- ☆40Updated last week
- Molecular interactions inference from single-cell multi-omics data☆27Updated 2 months ago
- The scripts used for analyzing JAX mouse dataset☆25Updated 10 months ago
- ☆28Updated 10 months ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆26Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆12Updated 9 months ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated 11 months ago
- Interactive visualisation of CellphoneDB results☆10Updated 7 months ago
- An end-to-end computational pipeline for large Perturb-seq screens☆13Updated 4 months ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 7 months ago
- A repository for benchmarking spatial deconvolution and mapping tools☆34Updated 3 months ago
- The scripts used for the analyses in TOME project☆25Updated 8 months ago
- ☆44Updated 2 weeks ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last week
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Bayesian model for RNA velocity estimation of periodic manifolds☆33Updated last year
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆19Updated last month
- Single cell omics biology annotations☆51Updated 4 months ago
- ☆52Updated 2 years ago
- ☆29Updated 5 months ago
- ACTIONet single-cell analysis framework☆42Updated 11 months ago
- BioTIP: Biological Tipping-Point Identification and Characterization☆21Updated 2 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆54Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 5 months ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆58Updated 5 years ago