☆16Sep 1, 2023Updated 2 years ago
Alternatives and similar repositories for oor_design_reproducibility
Users that are interested in oor_design_reproducibility are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆12Jul 29, 2023Updated 3 years ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- Code to reproduce analysis of Milo manuscript☆16Aug 3, 2022Updated 4 years ago
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Aug 6, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆62Apr 5, 2024Updated 2 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- ☆13Apr 16, 2021Updated 5 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆79Nov 11, 2025Updated 9 months ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆19Jun 9, 2025Updated last year
- Multi-resolution Variational Inference☆23Updated this week
- R and MATLAB scripts for MAGICAL☆12Jun 26, 2024Updated 2 years ago
- Multi-omic velocity inference☆120Oct 23, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pairwise Hierarchical Model☆20Mar 11, 2022Updated 4 years ago
- ☆14Jan 24, 2024Updated 2 years ago
- ☆21Dec 23, 2024Updated last year
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆42Jun 7, 2026Updated 2 months ago
- ☆12Sep 8, 2021Updated 4 years ago
- ☆21Jul 7, 2026Updated last month
- Code used for muti cellular factor analysis☆19Dec 13, 2023Updated 2 years ago
- Latent Embedding Multivariate Regression☆102Jul 29, 2026Updated 2 weeks ago
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆39Apr 16, 2025Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆61May 30, 2022Updated 4 years ago
- Functional and Learnable Cell dynamicS☆21May 13, 2025Updated last year
- ☆17Jul 12, 2024Updated 2 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 5 years ago
- ☆69Apr 22, 2026Updated 3 months ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- Python implementation of Milo for differential abundance testing on KNN graph☆85Feb 17, 2025Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Jul 13, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Nov 13, 2021Updated 4 years ago
- Multiple trajectory alignment of time-series data☆14Oct 14, 2023Updated 2 years ago
- ☆68Sep 13, 2024Updated last year
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆18Oct 17, 2024Updated last year
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆15Aug 17, 2023Updated 2 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- Consensus peaks of chromatin accessibility in the human genome☆18Dec 1, 2025Updated 8 months ago