INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads
☆17May 22, 2024Updated 2 years ago
Alternatives and similar repositories for Interstellar
Users that are interested in Interstellar are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 16, 2026Updated 4 months ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- Reproducibility Repo for mvTCR paper☆14Apr 2, 2024Updated 2 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆16Jul 27, 2026Updated last month
- ☆16Sep 1, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Explore the Hi-Cs☆12Jul 25, 2026Updated last month
- Scripts to design DropSynth oligos☆16Dec 2, 2020Updated 5 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- This repository contains codes used for the human fetal limb cell atlas.☆17Jan 28, 2025Updated last year
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- Source files for EDAV Fall 2021 Tues / Thurs Community Contribution Project☆24Oct 19, 2022Updated 3 years ago
- ☆40Jun 24, 2025Updated last year
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated last month
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆48May 12, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Sep 6, 2022Updated 3 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- A better, faster way to count guides in CRISPR screens.☆35Apr 30, 2026Updated 4 months ago
- ☆11Feb 20, 2024Updated 2 years ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- 3D geoms for plotnine (grammar of graphics in Python)☆13Aug 5, 2022Updated 4 years ago
- manually align specimens to annotated 3D spaces☆21May 10, 2023Updated 3 years ago
- A multiple alignment analyser☆21Aug 12, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Interactive box plot for clinical trial analysis☆14Updated this week
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆27Updated this week
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 10 months ago
- ☆17Mar 21, 2023Updated 3 years ago
- kallisto index tag extractor☆20Jul 6, 2019Updated 7 years ago
- Module 4 for HKU Single-cell Workshop☆12Jul 6, 2021Updated 5 years ago
- ☆12Jun 10, 2024Updated 2 years ago
- Integrative clustering for heterogeneous biomedical datasets.☆16May 4, 2020Updated 6 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated last year
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- ☆19Sep 18, 2019Updated 6 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated last year
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Feb 7, 2025Updated last year