stephenslab / fastglmpcaLinks
Fast algorithms for GLM-PCA.
☆14Updated 10 months ago
Alternatives and similar repositories for fastglmpca
Users that are interested in fastglmpca are comparing it to the libraries listed below
Sorting:
- ☆21Updated 2 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆18Updated 4 years ago
- Gene Expression Decomposition and Integration☆19Updated 11 months ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆11Updated last year
- ☆23Updated last year
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- scover☆24Updated 2 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆22Updated last year
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- epigenome analysis to rank transcription factors☆15Updated 6 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Updated 2 years ago
- CellAnn☆12Updated 2 years ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- ☆29Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Updated 2 years ago
- A toolking for cell type hierarchies: marker selection & consistent classification☆22Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- scVI extension for unspliced RNA☆16Updated 8 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- ☆19Updated last week
- ☆31Updated 3 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 5 years ago
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Updated last year
- kallisto index tag extractor☆20Updated 6 years ago