Alternatives and similar repositories for moslin

Users that are interested in moslin are comparing it to the libraries listed below

• AllonKleinLab / cospar
  ☆26Updated 2 years ago
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆30Updated 2 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆31Updated 9 months ago
• xichensf / magical
  R and MATLAB scripts for MAGICAL
  ☆11Updated last year
• jranek / EVI
  Integrating temporal gene expression modalities for trajectory inference and disease prediction
  ☆10Updated 3 years ago
• raphael-group / CalicoST
  Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics
  ☆44Updated 4 months ago
• pachterlab / CGCCP_2023
  scVI extension for unspliced RNA
  ☆16Updated 7 months ago
• loosolab / scanpro
  A modular tool for proportion analysis in single-cell sequencing data
  ☆24Updated 3 months ago
• tudaga / LabelCorrection
  Python code for cross-condition label refinement in single-cell data with HiDDEN
  ☆14Updated last year
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆24Updated last year
• Teichlab / sctk
  ☆44Updated last month
• Galaxeee / TedSim
  ☆10Updated 3 years ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• devsystemslab / HNOCA-tools
  Toolbox of the Human Neural Organoid Cell Atlas
  ☆27Updated last week
• MarioniLab / oor_benchmark
  A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data
  ☆13Updated last year
• GreenleafLab / brainchromatin
  Code used to analyze single cell RNA and ATAC sequencing in developing human brain
  ☆34Updated 3 years ago
• zakieh-tayyebi / CellSpace
  Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace
  ☆41Updated 11 months ago
• stephenslab / gbcd
  R package for generalized binary covariance decomposition.
  ☆13Updated 5 months ago
• yunguan-wang / Spacia
  ☆30Updated 7 months ago
• WWXkenmo / ICAnet
  Independent Component Analysis decipher functional modules for better cell clustering and annotation
  ☆17Updated 3 years ago
• dyxmvp / Spatial_ATAC-seq
  ☆23Updated 2 years ago
• KlugerLab / GeneTrajectory-python
  Python implementation of Gene Trajectory
  ☆30Updated last year
• azizilab / decipher
  A single-cell analysis toolkit to jointly analyze samples from distinct conditions
  ☆34Updated 8 months ago
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆21Updated 5 years ago
• soumelis-lab / ICELLNET
  ☆21Updated 5 months ago
• landau-lab / PATH
  ☆19Updated last year
• MarioniLab / StabMap
  Mosaic single cell data integration using non-overlapping features
  ☆37Updated 3 years ago
• LaughneyLab / ContactTracing_tutorial
  ☆17Updated last year
• EraslanBas / PerturbDecode
  An end-to-end computational pipeline for large Perturb-seq screens
  ☆15Updated 8 months ago
• theislab / cross_system_integration
  ☆13Updated 3 months ago