Alternatives and similar repositories for moslin:

Users that are interested in moslin are comparing it to the libraries listed below

• MarioniLab / oor_benchmark
  A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data
  ☆13Updated 3 months ago
• AllonKleinLab / cospar
  ☆26Updated last year
• MarioniLab / oor_design_reproducibility
  ☆14Updated last year
• tudaga / LabelCorrection
  Python code for cross-condition label refinement in single-cell data with HiDDEN
  ☆10Updated 4 months ago
• pachterlab / CGCCP_2023
  scVI extension for unspliced RNA
  ☆16Updated last month
• xinhe-lab / GSFA
  R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …
  ☆18Updated last year
• veltenlab / mitoClone
  ☆12Updated 3 years ago
• KPMP / Cell-State-Atlas-2022
  Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney
  ☆15Updated 11 months ago
• lciernik / ANS_signature_scoring
  A gene expression signature scoring Python package.
  ☆12Updated 2 months ago
• const-ae / transformGamPoi-Paper
  ☆26Updated last year
• theislab / mubind
  Learning motif contributions to cell transitions using sequence features and graphs.
  ☆28Updated 5 months ago
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆25Updated last year
• wanglab-broad / CAST
  CAST package
  ☆29Updated 3 months ago
• soumelis-lab / ICELLNET
  ☆19Updated 9 months ago
• loosolab / scanpro
  A modular tool for proportion analysis in single-cell sequencing data
  ☆18Updated 2 weeks ago
• mardzix / bcd_nano_CUTnTag
  ☆11Updated last year
• WWXkenmo / ICAnet
  Independent Component Analysis decipher functional modules for better cell clustering and annotation
  ☆16Updated 2 years ago
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆19Updated last year
• GreenleafLab / brainchromatin
  Code used to analyze single cell RNA and ATAC sequencing in developing human brain
  ☆31Updated 3 years ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆20Updated 10 months ago
• dbrg77 / ISSAAC-seq
  ☆16Updated last year
• Teichlab / sctk
  ☆34Updated 4 months ago
• tanaylab / embflow
  ☆12Updated 2 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 2 months ago
• LieberInstitute / VistoSeg
  Image processing pipeline for spatial projects
  ☆15Updated last year
• mbourgey / scRNA_GBM
  analysis script for GBM single cell RNA seq data
  ☆17Updated 3 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆23Updated 2 years ago
• ykat0 / capital
  ☆18Updated last year
• bendemeo / shannonca
  Information-based dimensionality reduction
  ☆29Updated 2 months ago