ChengxiangQiu / tome_codeLinks
The scripts used for the analyses in TOME project
☆24Updated 7 months ago
Alternatives and similar repositories for tome_code
Users that are interested in tome_code are comparing it to the libraries listed below
Sorting:
- Functional Inference of Gene Regulation☆45Updated last year
- R package IReNA☆28Updated 8 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 6 months ago
- ☆32Updated 5 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets☆39Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆20Updated 3 years ago
- ☆39Updated 3 years ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- ☆34Updated last year
- ☆27Updated last year
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- The scripts used for analyzing JAX mouse dataset☆25Updated 8 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- ☆49Updated 11 months ago
- ☆36Updated 2 weeks ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 10 months ago
- BioTIP: Biological Tipping-Point Identification and Characterization☆20Updated 3 weeks ago
- ☆54Updated 2 weeks ago
- ☆45Updated last year
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 2 years ago
- cell type specific, trait-associated gene regulation☆27Updated 3 months ago
- scWGCNA☆61Updated 2 years ago
- tutorials for spateo package☆20Updated 6 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated last year
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated last week
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Updated last year