mervesa / HiCDCPlusLinks
HiCDCPlus
☆17Updated 3 years ago
Alternatives and similar repositories for HiCDCPlus
Users that are interested in HiCDCPlus are comparing it to the libraries listed below
Sorting:
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 10 months ago
- HiC for copy Number variation and Translocation detection☆39Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆61Updated 8 months ago
- ☆23Updated 4 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- ☆15Updated 3 years ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- Cellsnake tool main repo☆33Updated last year
- Tutorial Website☆59Updated 4 years ago
- Peak calling for 4C data☆12Updated 7 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 8 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- Statistically Significant loops from HiChIP data☆44Updated last year
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated 10 months ago
- Comparison of Hi-C Experiments using Structural Similarity.☆27Updated 2 years ago
- ☆31Updated 8 months ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆34Updated 9 months ago
- ☆24Updated 4 years ago
- Code for finding putative enhancers using Hi-C data☆28Updated 7 years ago
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago