cliffzhou92 / STTLinks
☆19Updated last year
Alternatives and similar repositories for STT
Users that are interested in STT are comparing it to the libraries listed below
Sorting:
- Python implementation of Gene Trajectory☆30Updated last year
- ☆26Updated 2 years ago
- ☆46Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Updated 3 years ago
- ☆41Updated 7 months ago
- cell type specific, trait-associated gene regulation☆29Updated 10 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 11 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated 4 months ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆46Updated 5 months ago
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆14Updated last month
- ☆25Updated 11 months ago
- Publically accessible code for DIISCO method☆12Updated 3 months ago
- ☆30Updated 8 months ago
- ☆21Updated 6 months ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Updated last year
- ☆29Updated this week
- ☆26Updated 10 months ago
- Codes used in LISTA project.☆15Updated last year
- Data analysis for the moscot-framework project☆19Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated last year
- SPatial INtegration of spatially resolved transcriptomics datasets☆18Updated 10 months ago
- Toolbox of the Human Neural Organoid Cell Atlas☆29Updated this week
- ☆17Updated last year
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated this week
- tutorials for spateo package☆20Updated last year
- ☆62Updated last month
- Computational pipeline to process EasySci-RNA data.☆22Updated 2 years ago
- R and MATLAB scripts for MAGICAL☆11Updated last year
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year