Alternatives and similar repositories for mikropml

Users that are interested in mikropml are comparing it to the libraries listed below

• KarstensLab / microshades
  This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…
  ☆68Updated last year
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆34Updated 5 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆74Updated 2 years ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆15Updated 7 years ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 6 years ago
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated 2 years ago
• ying14 / yingtools2
  Ying's tools for analysis, with particular focus on microbiome data
  ☆41Updated last week
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆27Updated 5 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆93Updated this week
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆23Updated last month
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆23Updated 3 years ago
• statdivlab / tinyvamp
  ☆19Updated 2 years ago
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆106Updated 6 months ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆30Updated 2 years ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆71Updated 3 months ago
• CharlieCarpenter / tidyMicro
  tidyMicro GitHup Repository
  ☆19Updated 3 years ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆74Updated 2 months ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆57Updated last year
• adw96 / breakaway
  Species richness with high diversity
  ☆67Updated last month
• wejlab / MetaScope
  An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)
  ☆19Updated this week
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆39Updated 9 years ago
• aghozlane / shaman
  SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…
  ☆13Updated 7 months ago
• sprouffske / growthcurver
  Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…
  ☆48Updated 3 years ago
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated last month
• mcalgaro93 / sc2meta
  Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…
  ☆10Updated 5 years ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 4 years ago
• ArtPoon / BioID
  Source files for online resources of Bioinformatics of Infectious Diseases course
  ☆22Updated 5 years ago
• itsmisterbrown / microfiltR
  accessory functions for processing microbial community data
  ☆12Updated 2 years ago
• microbiome / mia
  Microbiome analysis
  ☆52Updated last week
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆12Updated 9 months ago