rprops / MetaG_analysis_workflowLinks
☆14Updated 7 years ago
Alternatives and similar repositories for MetaG_analysis_workflow
Users that are interested in MetaG_analysis_workflow are comparing it to the libraries listed below
Sorting:
- Long read metagenomics practical at EBAME18☆18Updated 6 years ago
- a pipeline for reconciliation of phylogenetic histories within a bacterial pangenome☆49Updated 2 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Updated 7 years ago
- Ley Lab MetaGenome Profiler DataBase generator☆50Updated 2 years ago
- Tools for extracting individual genomes from metagenomes☆17Updated last year
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆46Updated 5 years ago
- Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)☆62Updated 2 years ago
- Predict plasmids from uncorrected long read data☆40Updated 5 years ago
- ☆25Updated 6 years ago
- ☆36Updated 3 years ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆28Updated 8 months ago
- ☆20Updated 9 months ago
- Pipeline for Reproducible and Scalable Integration of Metagenomic and Metatranscriptomic Data☆14Updated 3 weeks ago
- Calculate Average Nucleotide Identity (ANI) for prokaryotic genomes☆19Updated 3 years ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 4 years ago
- 🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files☆24Updated 7 years ago
- An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences☆25Updated 2 years ago
- MAG Circularization Method☆33Updated 3 years ago
- Interactive, web tool for exploring pan-genome of bacterial strains☆45Updated 2 years ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 2 years ago
- ☆20Updated 8 years ago
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20Updated 8 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- ☆18Updated 3 years ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- General procedure for making QIIME 2 compatible SILVA reference files☆20Updated 8 months ago
- workflows for offline analysis of 16S rRNA Nanopore data☆13Updated 2 years ago
- Estimate metagenomic coverage and sequence diversity☆54Updated 10 months ago