Alternatives and similar repositories for eASV-pipeline-for-515Y-926R:

Users that are interested in eASV-pipeline-for-515Y-926R are comparing it to the libraries listed below

• moyn413 / nifHdada2
  dada2 formatted nifH database
  ☆11Updated 8 months ago
• stegen / Stegen_etal_ISME_2013
  Code for running analyses carried out in Stegen et al. 2013, ISME
  ☆29Updated 6 years ago
• Russel88 / DOC
  Dissimilarity Overlap Curve analysis
  ☆11Updated 2 years ago
• ZengJiaxiong / Phosphorus-cycling-database
  This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.
  ☆31Updated 2 years ago
• qichao1984 / NCyc
  ☆49Updated 4 years ago
• GuillemSalazar / EcolUtils
  Utilities for community ecology analysis
  ☆18Updated 4 years ago
• microUCPH / amplicon_data_analysis
  Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project
  ☆11Updated 2 years ago
• allind / EukDetect
  ☆47Updated 9 months ago
• ErnakovichLab / dada2_ernakovichlab
  ☆14Updated this week
• gmteunisse / fantaxtic
  Fantaxtic - Nested Bar Plots for Phyloseq Data
  ☆27Updated 6 months ago
• donaldtmcknight / microDecon
  An R package for removing contamination from metabarcoding (e.g., microbiome) datasets post-sequencing
  ☆14Updated last year
• rogotoh / PMiFish
  ☆11Updated 10 months ago
• mahsa-mousavi / eDNAFlow
  ☆20Updated last year
• Linwei-Wu / Global-bacterial-diversity-in-WWTPs
  ☆22Updated 5 years ago
• statdivlab / radEmu
  ☆51Updated this week
• Russel88 / MicEco
  Various functions for analysis of microbial community data
  ☆42Updated 2 years ago
• jlw-ecoevo / gRodon2
  ☆40Updated 5 months ago
• minoh0201 / MetaCompare
  MetaCompare
  ☆17Updated 10 months ago
• ukaraoz / microtrait
  ☆29Updated 10 months ago
• xuechunxu / DiTing
  DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data
  ☆40Updated 2 months ago
• tobiasgf / lulu
  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
  ☆63Updated last year
• qichao1984 / SCycDB
  ☆15Updated 3 years ago
• ericcapo / marky-coco
  Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes
  ☆10Updated 8 months ago
• ChengGaoBerkeley / EPICON.Mycobiome
  ☆13Updated 3 years ago
• AlexanderLabWHOI / EukHeist
  ☆25Updated last year
• ZhenyanZhang / ARG-global
  Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…
  ☆15Updated 2 years ago
• MadsAlbertsen / ampvis
  [deprecated] Please use ampvis2
  ☆8Updated 7 years ago
• KatariinaParnanen / MobileGeneticElementDatabase
  Contains a fasta format database of a large variety of mobile genetic elements and an annotation file
  ☆43Updated 3 years ago
• snayfach / MAGpurify
  Improvement of metagenome-assembled genomes
  ☆50Updated 4 years ago