Alternatives and similar repositories for mice8992-2016

Users that are interested in mice8992-2016 are comparing it to the libraries listed below

• mibwurrepo / Microbial-bioinformatics-introductory-course-Material-2018
  Course material for OPEN & REPRODUCIBLE MICROBIOME DATA ANALYSIS SPRING SCHOOL
  ☆28Updated 5 years ago
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆68Updated 5 years ago
• grimmlab / MicrobiomeBestPracticeReview
  Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
  ☆120Updated last year
• zellerlab / crc_meta
  Code and analysis results for the CRC shotgun meta-analysis
  ☆38Updated 2 years ago
• microsud / Tools-Microbiome-Analysis
  A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
  ☆115Updated 2 years ago
• sib-swiss / first-steps-with-R-training
  repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
  ☆50Updated 2 months ago
• farhadm1990 / 16S-rRNA-amplicon
  Analysis of (gut) microbiome in Qiime2 and R.
  ☆20Updated last year
• gavinmdouglas / picrust2_manuscript
  ☆24Updated 5 years ago
• FrederickHuangLin / ANCOM-Code-Archive
  Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…
  ☆63Updated 3 years ago
• donovan-h-parks / STAMP
  Statistical Analysis of Metagenomic Profiles
  ☆93Updated 5 years ago
• wejlab / animalcules
  R shiny app for interactive microbiome analysis
  ☆55Updated 3 months ago
• HCBravoLab / metagenomeSeq
  Statistical analysis for sparse high-throughput sequencing
  ☆69Updated 9 months ago
• twbattaglia / MicrobeDS
  A repository for large-scale microbiome datasets, formatted for phyloseq
  ☆38Updated last year
• shandley / Microbiome-Analysis-Using-R
  Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
  ☆27Updated 3 years ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆124Updated 2 weeks ago
• GRONINGEN-MICROBIOME-CENTRE / Groningen-Microbiome
  Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…
  ☆58Updated 3 months ago
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆59Updated 4 months ago
• umerijaz / microbiomeSeq
  An R package for microbial community analysis in an environmental context
  ☆67Updated 4 years ago
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆140Updated 2 months ago
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆119Updated last month
• picrust / picrust
  Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…
  ☆92Updated 3 weeks ago
• biobakery / Maaslin2
  MaAsLin2: Microbiome Multivariate Association with Linear Models
  ☆145Updated 10 months ago
• microbiome / mia
  Microbiome analysis
  ☆52Updated last week
• zoecastillo / microbiomeExplorer
  The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…
  ☆72Updated 3 years ago
• nearinj / Comparison_of_DA_microbiome_methods
  ☆56Updated last year
• danknights / sourcetracker
  ☆77Updated last year
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆126Updated last week
• cafferychen777 / MicrobiomeStat
  Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
  ☆44Updated this week
• microbiome / OMA
  Orchestrating Microbiome Analysis
  ☆101Updated this week
• ngs-docs / 2017-ucsc-metagenomics
  Workshop materials for shotgun metagenomics
  ☆36Updated 8 years ago