SchlossLab / MiSeq_WetLab_SOPLinks
☆60Updated 5 years ago
Alternatives and similar repositories for MiSeq_WetLab_SOP
Users that are interested in MiSeq_WetLab_SOP are comparing it to the libraries listed below
Sorting:
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data☆160Updated 2 years ago
- Metatranscriptomics Tutorial☆63Updated 2 years ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆81Updated 9 years ago
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 3 years ago
- ☆76Updated last year
- Statistical Analysis of Metagenomic Profiles☆93Updated 5 years ago
- treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes☆103Updated 5 months ago
- An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters☆89Updated last year
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆80Updated last week
- Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWoo…☆56Updated 3 years ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆67Updated last year
- Convert various sequence formats to FASTA☆136Updated 3 years ago
- Course material for the metagenomics course☆44Updated 3 years ago
- Micro 612 genomics workshop☆37Updated 4 years ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆75Updated 2 years ago
- Rapid and scalable correlation estimation for compositional data☆90Updated last year
- Making whole bacterial genome sequencing data analysis easy☆108Updated 2 months ago
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆56Updated last year
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆116Updated 3 weeks ago
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆115Updated 2 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆119Updated last year
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆32Updated 4 years ago
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆47Updated 4 years ago
- Development version of Easyfig☆98Updated last year
- Massively parallel phylogenetic placement of genetic sequences☆84Updated 2 years ago
- functions to analyse sanger sequencing reads in R☆101Updated 4 months ago
- 🍄 Qiime2 ITS classifiers for the UNITE database☆42Updated 3 months ago
- Statistical analysis for sparse high-throughput sequencing☆69Updated 7 months ago
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆71Updated 2 years ago
- A tutorial on methods of 16S analysis with QIIME 1☆70Updated 5 years ago