SchlossLab / MiSeq_WetLab_SOPLinks
☆61Updated 5 years ago
Alternatives and similar repositories for MiSeq_WetLab_SOP
Users that are interested in MiSeq_WetLab_SOP are comparing it to the libraries listed below
Sorting:
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data☆161Updated 2 years ago
- Statistical Analysis of Metagenomic Profiles☆93Updated 5 years ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆67Updated last year
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 3 years ago
- Metatranscriptomics Tutorial☆63Updated 2 years ago
- treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes☆103Updated 6 months ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆81Updated 9 years ago
- An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters☆90Updated last year
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆81Updated last month
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆115Updated 2 years ago
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆116Updated last month
- Making whole bacterial genome sequencing data analysis easy☆109Updated 3 months ago
- ☆76Updated last year
- BSR-Based Allele Calling Algorithm☆149Updated last week
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆120Updated last year
- 🍄 Qiime2 ITS classifiers for the UNITE database☆44Updated this week
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆77Updated 2 years ago
- Convert various sequence formats to FASTA☆138Updated 3 years ago
- Rapid and scalable correlation estimation for compositional data☆92Updated last year
- Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWoo…☆56Updated 3 years ago
- Make Picrust2 Output Analysis and Visualization Easier☆148Updated this week
- Protist Ribosomal Reference database (PR2) - SSU rRNA gene database☆82Updated last month
- Pairwise SNP distance matrix from a FASTA sequence alignment☆137Updated last year
- Clustering cONtigs with COverage and ComposiTion☆132Updated 5 years ago
- Phylogenetic and taxonomic analysis for genomes and metagenomes☆82Updated 9 years ago
- This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.☆29Updated 8 months ago
- Automatically exported from code.google.com/p/jmodeltest2☆80Updated 3 years ago
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆55Updated last year
- Generating iToL annotations from Spreadsheet or CSV files☆103Updated 5 years ago
- Micro 612 genomics workshop☆37Updated 4 years ago