Prediction of microbial interactions in complex communities
☆11Aug 14, 2024Updated last year
Alternatives and similar repositories for OrtSuite
Users that are interested in OrtSuite are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Population genomics from metagenomes☆13Sep 1, 2024Updated last year
- FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorer☆14Jul 2, 2019Updated 6 years ago
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆89Aug 13, 2024Updated last year
- Tool to estimate genome quality of microbial eukaryotes☆39Aug 1, 2025Updated 7 months ago
- ☆10Mar 29, 2025Updated 11 months ago
- metabolic heatmap☆22May 12, 2019Updated 6 years ago
- ☆25Jun 20, 2023Updated 2 years ago
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated last year
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆17Feb 5, 2022Updated 4 years ago
- A metatranscriptomic pipeline optimized for the study of microeukaryotes.☆17Dec 30, 2025Updated 2 months ago
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆11Jan 23, 2026Updated 2 months ago
- Automatic eukaryotic taxonomic classification☆29May 9, 2025Updated 10 months ago
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Mar 14, 2024Updated 2 years ago
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated last year
- ☆24Dec 5, 2018Updated 7 years ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆27Jul 22, 2024Updated last year
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 2 years ago
- ☆17Sep 10, 2024Updated last year
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆14Jul 14, 2024Updated last year
- Predict prokaryotic host for phage metagenomic sequences☆55Sep 17, 2024Updated last year
- ☆33Jul 16, 2023Updated 2 years ago
- ☆14Sep 2, 2021Updated 4 years ago
- ☆20Apr 24, 2025Updated 11 months ago
- ☆57Mar 17, 2026Updated last week
- Linking MAGs with 16S rRNA marker genes☆27Feb 8, 2025Updated last year
- Detect contigs of complete circular genomes☆23Jun 6, 2019Updated 6 years ago
- ☆35Jun 26, 2025Updated 8 months ago
- ☆14Oct 14, 2023Updated 2 years ago
- Implementation of CoNet in R☆16Oct 16, 2019Updated 6 years ago
- Processing support for Greengenes2☆14Jul 31, 2023Updated 2 years ago
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆147Mar 4, 2026Updated 2 weeks ago
- Fast tool to build the core genome of prokaryotic genomes. Can handle large datasets. Dependencis: Usearch & Numpy☆10Nov 26, 2025Updated 3 months ago
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated 2 months ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 4 months ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated last year
- ☆29Jun 12, 2024Updated last year
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆30Jun 13, 2023Updated 2 years ago
- Computation of average nucleotide identity with the use of MMseqs2☆16Dec 11, 2024Updated last year
- A simple script to display stuff on a world map with R and ggplot☆17Feb 17, 2026Updated last month