Look Up Guild Information for Fungi in R
☆26Aug 14, 2026Updated 2 months ago
Alternatives and similar repositories for FUNGuildR
Users that are interested in FUNGuildR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Threshold Indicator Taxa Analysis☆16Mar 3, 2026Updated 7 months ago
- A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio☆15Oct 16, 2026Updated 2 weeks ago
- FUNGuild: parsing OTUs into functional guilds☆136Apr 26, 2024Updated 2 years ago
- R package MiscMetabar: Miscellaneous functions for metabarcoding analysis☆21Oct 22, 2026Updated last week
- A dynamic database of fungal trait measurements☆90Feb 26, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Standard tools and protocols for MiSeq amplicon sequencing of 16S rRNA genes☆10Nov 14, 2022Updated 3 years ago
- mvabund updates☆10Mar 10, 2024Updated 2 years ago
- ☆20Jun 8, 2020Updated 6 years ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆11Jul 28, 2019Updated 7 years ago
- ☆21Updated this week
- Dissimilarity Overlap Curve analysis☆11Nov 14, 2022Updated 3 years ago
- Various functions for analysis of microbial community data☆48Apr 15, 2026Updated 6 months ago
- R package to plot Whittaker' biomes☆10Mar 2, 2017Updated 9 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Oct 30, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A R package to apply the climate reconstruction CREST.☆14Feb 23, 2026Updated 8 months ago
- Automatic Calculation of Effects for Piecewise Structural Equation Models☆17Sep 13, 2024Updated 2 years ago
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆13Mar 25, 2026Updated 7 months ago
- ☆12Feb 26, 2019Updated 7 years ago
- creating hybrid-gene phylogenetic trees for diversity analyses☆30Aug 23, 2022Updated 4 years ago
- Miscellaneous functions for metagenomic analysis.☆53May 14, 2026Updated 5 months ago
- Generalized Linear Latent Variable Models☆63Updated this week
- R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.☆128Updated this week
- R package for computing alpha and beta contributional diversity metrics☆11May 5, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 🍄 Qiime2 ITS classifiers for the UNITE database☆55Sep 11, 2026Updated last month
- UTK Bioinformatics Applications☆12Nov 9, 2018Updated 7 years ago
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated 2 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆98Sep 24, 2026Updated last month
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23May 16, 2026Updated 5 months ago
- ☆121Jun 26, 2026Updated 4 months ago
- Population genomics from metagenomes☆13Sep 1, 2024Updated 2 years ago
- A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.☆84May 14, 2019Updated 7 years ago
- GLLVM Workshop material for the BES 2020 Festival of Ecology☆29Apr 8, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- diversity estimation under ecological networks☆83Jun 16, 2026Updated 4 months ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆149Jul 17, 2026Updated 3 months ago
- User-Friendly R Package for Supervised Machine Learning Pipelines☆65Aug 29, 2026Updated 2 months ago
- Genomics lessons for week 4 of the Microbial Diversity course at the Marine Biological Lab in Woods Hole, MA.☆22Aug 15, 2017Updated 9 years ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 7 years ago
- Linear Decomposition Model☆25Jun 16, 2023Updated 3 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆19Jul 31, 2025Updated last year