CenterForStatistics-UGent / RCMLinks
A model-based visualization method for microbiome data
☆16Updated 2 years ago
Alternatives and similar repositories for RCM
Users that are interested in RCM are comparing it to the libraries listed below
Sorting:
- STAMPS 2018 course☆16Updated 6 years ago
- An Amazing Shiny App☆17Updated 3 years ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- Workshop for NGS'18 conference, Barcelona 2018☆24Updated 6 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- ggplots for nested data☆10Updated 10 months ago
- ☆19Updated last year
- R package to run BEAST2☆11Updated 3 weeks ago
- Ordination lectures for Ecological Methods in Oulu☆19Updated 10 months ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆12Updated 5 years ago
- Species richness with high diversity☆68Updated last month
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- R tools for integrating phylogenies and ecology☆35Updated last year
- accessory functions for processing microbial community data☆12Updated 2 years ago
- This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…☆67Updated 11 months ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 10 months ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- An interactive web application for demonstrating and using phyloseq.☆60Updated 5 years ago
- Linear Decomposition Model☆24Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last month
- This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…☆16Updated last year
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆14Updated last year
- Informatic Sequence Classification Trees☆14Updated last week
- Dendrograms for Evolutionary Analysis☆11Updated 5 years ago
- R package for computing alpha and beta contributional diversity metrics☆10Updated 2 years ago
- ☆17Updated last week
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆37Updated 9 years ago
- babette is an R package to work with BEAST2☆45Updated 3 weeks ago
- Microbial community analysis tools in R☆21Updated 2 years ago
- Biology 202 Course Website☆18Updated 4 years ago