PlantGeneticsLab / TIGERLinks
Toolkits Integrated for Genetic and Evolutionary Research
☆17Updated 2 months ago
Alternatives and similar repositories for TIGER
Users that are interested in TIGER are comparing it to the libraries listed below
Sorting:
- Genomic related tools☆71Updated 3 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆94Updated 8 months ago
- A pipeline used to identify different modes of duplicated gene pairs☆105Updated 2 weeks ago
- ☆81Updated last year
- An ultra-fast and efficient genomic tool for coverage calculation☆157Updated 4 months ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 4 years ago
- Code to compute the XP-CLR statistic to infer natural selection☆98Updated 3 years ago
- NLR-Annotator upload☆69Updated 2 years ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆37Updated 4 years ago
- WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes☆141Updated 7 months ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆51Updated 5 years ago
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆97Updated 2 months ago
- MutMap pipeline to identify causative mutations responsible for a phenotype☆54Updated 6 months ago
- Dfam Transposable Element Tools Docker container.☆99Updated last month
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- 整理常用的群体遗传学分析流程和脚本☆112Updated last year
- ☆71Updated 5 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆56Updated last year
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆189Updated last month
- accurate LiftOver tool for new genome assemblies☆132Updated last year
- Constructing a pangenome gene graph☆193Updated 2 months ago
- Workflow for Building Microsynteny Networks☆55Updated 3 years ago
- Collection of tools for the analysis of CpG data☆87Updated last month
- QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis☆79Updated 5 years ago
- ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data☆177Updated 9 months ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆147Updated 3 weeks ago
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆185Updated last month
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆82Updated 6 months ago