GMOD / indexedfasta-jsLinks
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
☆12Updated last week
Alternatives and similar repositories for indexedfasta-js
Users that are interested in indexedfasta-js are comparing it to the libraries listed below
Sorting:
- High performance WebGL genome visualization☆15Updated 4 years ago
- Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser☆14Updated 2 weeks ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Updated last year
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Updated last week
- a minimal, scriptable genome browser for python☆51Updated 10 months ago
- ☆26Updated 2 years ago
- ☆10Updated this week
- Single cell analysis in Javascript☆22Updated 2 months ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 5 months ago
- bedtools-like functionality for interval sets in rust☆54Updated 2 months ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 7 years ago
- High performance Variant Call Format (VCF) parser in pure JavaScript☆25Updated last week
- Fully automated generation of UCSC assembly hubs☆34Updated last year
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆35Updated this week
- Fast sequencing data quality metrics☆28Updated last month
- A python package for showing JBrowse views☆26Updated last year
- BED QC tool (in the making)☆16Updated 3 years ago
- A fast dataloader for bigwig files made for machine learning☆28Updated 5 months ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆60Updated 2 weeks ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 7 months ago
- gia: Genomic Interval Arithmetic☆64Updated last year
- A Rust library and command line tool for working with genomic ranges and their data.☆100Updated last year
- Single-cell analysis methods in Rust☆27Updated 4 months ago
- Simple pure Python SAM parser and objects for working with SAM records☆63Updated 3 years ago
- A bioinformatics pipeline to phase and impute genetic data☆25Updated last week
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- ☆32Updated 4 years ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Updated 10 months ago
- A mosaic genome painting tool for plant genomes☆17Updated 7 months ago
- Efficiently read and write sequencing data from Python☆67Updated 2 weeks ago