GMOD / indexedfasta-jsLinks
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
☆12Updated 2 months ago
Alternatives and similar repositories for indexedfasta-js
Users that are interested in indexedfasta-js are comparing it to the libraries listed below
Sorting:
- Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser☆14Updated last month
- High performance WebGL genome visualization☆15Updated 3 years ago
- Python NGS Repository☆9Updated 11 months ago
- HiGlass track for displaying arcs between disconnected regions☆9Updated 2 years ago
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆27Updated 2 weeks ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Updated last year
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆40Updated 3 months ago
- a minimal, scriptable genome browser for python☆51Updated 7 months ago
- High performance Variant Call Format (VCF) parser in pure JavaScript☆24Updated last month
- Python bindings to UCSC BigWig and BigBed library☆33Updated 3 months ago
- Single cell analysis in Javascript☆21Updated last week
- ☆10Updated 4 months ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 4 months ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 6 years ago
- ☆26Updated 2 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Fast sequencing data quality metrics☆26Updated 2 months ago
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- bedtools-like functionality for interval sets in rust☆52Updated 11 months ago
- A python package for showing JBrowse views☆26Updated last year
- Fast FASTQ sample demultiplexing in Rust.☆63Updated 2 months ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆59Updated 2 weeks ago
- Builds a PEP from SRA or GEO accessions☆52Updated 3 weeks ago
- Search for a set of compatible indexes for your sequencing experiment☆11Updated 5 years ago
- structure detection program☆17Updated 8 months ago
- BED QC tool (in the making)☆16Updated 2 years ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆28Updated 3 weeks ago
- Parse BAM and BAM index files in javascript for node and the browser☆24Updated last month
- ☆31Updated 4 years ago
- A fast dataloader for bigwig files made for machine learning☆28Updated 3 months ago