lonelyjoeparker / befi-bats-gui
Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.
☆11Updated 7 years ago
Alternatives and similar repositories for befi-bats-gui:
Users that are interested in befi-bats-gui are comparing it to the libraries listed below
- ☆12Updated 5 years ago
- map Illumina metagenomes to genomes!☆38Updated 2 weeks ago
- Pipeline for the identification of (coding) gene structures in draft genomes.☆27Updated 10 months ago
- ☆19Updated 9 months ago
- Scalable relaxed clock phylogenetic dating☆24Updated last year
- Inference of putative transmission phylogenetic clusters☆11Updated 4 years ago
- Reference-guided multiple sequence alignment of viral genomes☆65Updated 2 months ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆20Updated 6 months ago
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆32Updated 2 months ago
- Main development repository for SpreadGL☆18Updated 6 months ago
- multiPhATE with comparative genomics☆18Updated 3 years ago
- ☆9Updated 2 years ago
- R Data Exploration for Serratus☆15Updated 2 years ago
- Reference genome quality scores☆19Updated 4 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆18Updated 4 years ago
- ☆17Updated last month
- Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.☆24Updated 5 months ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 3 years ago
- Influenza genome analysis Nextflow workflow☆26Updated this week
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- Estimating time trees from very large phylogenies☆26Updated 8 months ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆19Updated 2 years ago
- ☆17Updated 9 months ago
- Build a map of genes present across a set of microbial genomes☆14Updated 2 weeks ago
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆33Updated last week
- Calculate distances between phylogenetic trees in R☆32Updated last month
- An R-wrapper for lsd2☆9Updated last year
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Updated 3 years ago
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆21Updated 10 months ago
- Bacterial phylogenetics in BEAST 2.☆17Updated 2 years ago