Alternatives and similar repositories for euroibd

Users that are interested in euroibd are comparing it to the libraries listed below

• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 5 years ago
• cannin / snp_plotter
  snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.
  ☆19Updated last year
• gkichaev / PAINTOR_V2.1
  ☆22Updated 8 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆12Updated 5 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• QTCAT / qtcat
  Quantitative Trait Cluster Association Test in R
  ☆25Updated 4 years ago
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆44Updated last year
• gc5k / GEAR
  GEAR [GEnetic Analysis Repository], contact chenguobo@gmail.com;
  ☆21Updated 3 years ago
• hanchenphd / GMMAT
  Generalized linear Mixed Model Association Tests
  ☆44Updated last year
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆35Updated 7 years ago
• mturchin20 / bmass
  R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)
  ☆10Updated 5 years ago
• NovembreLab / eems-around-the-world
  Repo to analyze population genetic data with many different methods
  ☆15Updated 5 years ago
• genomematt / xenomapper
  A utility for splitting mixed origin NGS reads
  ☆10Updated 4 years ago
• hopkinsmarinestation / Population-Genomics-via-RNAseq
  Guide to transcriptome assembly & analysis
  ☆21Updated 8 years ago
• DudbridgeLab / avengeme
  Statistical properties of polygenic risk scores
  ☆19Updated 5 years ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆31Updated 11 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆41Updated last year
• bcm-uga / lfmm
  Fitting latent factor mixed models
  ☆13Updated 5 years ago
• williamslab / ibis
  Algorithm for rapid, phase-free detection of long identical by descent segments
  ☆22Updated last year
• stephenslab / ldshrink
  ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium
  ☆13Updated 4 years ago
• dcjones / isolator
  Rapid and robust analysis of RNA-Seq experiments.
  ☆32Updated 9 years ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆21Updated 11 months ago
• msesia / knockoffgwas
  A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.
  ☆15Updated 3 years ago
• akiomiyao / tif
  Transposon Insertion Finder - Detection of new TE insertions in NGS data
  ☆20Updated 4 months ago
• rqtl / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆34Updated 3 months ago
• lamortenera / bamsignals
  R package to quickly obtain count vectors from indexed bam files
  ☆15Updated 3 months ago
• bhofmei / bhofmei-jbplugins
  All JBrowse plugins created by Brigitte Hofmeister
  ☆10Updated 7 years ago
• andrej-fischer / cloneHD
  High-definition reconstruction of clonal composition from next-generation sequencing data
  ☆41Updated 9 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated last month