Alternatives and similar repositories for DSS:

Users that are interested in DSS are comparing it to the libraries listed below

• Xinglab / rMATS-long
  ☆27Updated 2 months ago
• sartorlab / methylSig
  R package for DNA methylation analysis
  ☆17Updated 5 months ago
• AndreasHeger / gat
  Genomic Association Tester
  ☆30Updated last year
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆37Updated 2 years ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆23Updated 2 years ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆32Updated 2 years ago
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆26Updated 6 years ago
• mskilab-org / gGnome
  R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework
  ☆39Updated 5 months ago
• Kingsford-Group / squid
  SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
  ☆42Updated 2 years ago
• julienrichardalbert / MEA
  ☆9Updated 4 years ago
• maxplanck-ie / HiCAssembler
  Software to assemble contigs/scaffolds into chromosomes using Hi-C data
  ☆28Updated 4 months ago
• jmw86069 / splicejam
  Sashimi plots for RNA-seq data using detected transcripts
  ☆27Updated last month
• plantformatics / Socrates
  ☆21Updated 7 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 2 months ago
• griffithlab / VAtools
  A set of tools to annotate VCF files with expression and readcount data
  ☆29Updated 5 months ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• umccr / umccrise
  DRAGEN Tumor/Normal workflow post-processing
  ☆22Updated last year
• smshuai / DriverPower
  DriverPower
  ☆26Updated 3 weeks ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆41Updated this week
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆16Updated 2 years ago
• deWitLab / GENOVA
  GENome Organisation Visual Analytics
  ☆15Updated 3 years ago
• AngelCampos / txtools
  An R package to process and analyze transcriptomic data
  ☆16Updated 5 months ago
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 2 years ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 2 years ago
• huishenlab / biscuit
  BISulfite-seq CUI Toolkit
  ☆17Updated last month
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆28Updated 6 months ago
• gzhmat / ShinyCNV
  a Shiny/R application to view and annotate copy number variations
  ☆28Updated last year
• statgen / fivex
  Interactive eQTL visualizations
  ☆13Updated 2 years ago
• XiDsLab / TAGET
  ☆17Updated 2 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated 2 weeks ago