Uauy-Lab / WheatHomoeologExpressionLinks
☆15Updated 5 years ago
Alternatives and similar repositories for WheatHomoeologExpression
Users that are interested in WheatHomoeologExpression are comparing it to the libraries listed below
Sorting:
- ☆14Updated 7 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- ☆22Updated 6 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last month
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆27Updated 5 years ago
- iTAK☆41Updated last year
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 7 years ago
- IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆18Updated 7 years ago
- Structural variant merging tool☆52Updated 10 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆28Updated 4 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 6 months ago
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- Updated and optimized fork of BSMAP☆22Updated 4 years ago
- ☆21Updated 2 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last week
- Error correction of ONT transcript reads☆58Updated last year
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆21Updated 3 years ago
- ☆34Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 6 years ago
- ☆21Updated 5 years ago
- TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)☆21Updated 5 years ago