Uauy-Lab / WheatHomoeologExpressionLinks
☆15Updated 5 years ago
Alternatives and similar repositories for WheatHomoeologExpression
Users that are interested in WheatHomoeologExpression are comparing it to the libraries listed below
Sorting:
- A pipeline for isoseq☆23Updated 7 years ago
- ☆14Updated 7 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated last year
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 5 months ago
- ☆22Updated 6 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 11 months ago
- ☆21Updated 3 years ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆29Updated 6 years ago
- Structural variant merging tool☆57Updated last year
- GENE-SWitCH project RNA-Seq analysis pipeline☆29Updated 9 months ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 7 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- A simple tool to calculate reads number and total base count in FASTQ file☆21Updated 6 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- iTAK☆45Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 3 weeks ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- ☆25Updated 4 months ago
- ☆17Updated 5 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- ☆16Updated 3 years ago
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆34Updated 5 months ago
- ☆31Updated last year