LieberInstitute / brainseq_phase2Links
BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium
☆10Updated last year
Alternatives and similar repositories for brainseq_phase2
Users that are interested in brainseq_phase2 are comparing it to the libraries listed below
Sorting:
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- PredictDB Pipeline for GTEx v7 data☆17Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Create Regional Association Plots☆12Updated 10 months ago
- ☆11Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- ☆22Updated 4 months ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 6 months ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- TWAS-pipeline☆22Updated 4 years ago
- Fine-mapping with infinitesimal effects☆15Updated last week
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- ☆20Updated last year
- R package for tissue-specific gene enrichment☆14Updated 3 years ago
- pipelines to process scRNA-seq data☆12Updated 4 years ago
- GWAS genetics Fine-mapping method☆23Updated 7 months ago
- A Toolset for Chromosome X-Wide Association Studies☆10Updated 7 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆15Updated 4 years ago
- ☆20Updated 11 months ago
- ☆10Updated 3 weeks ago
- Pairwise Hierarchical Model☆18Updated 3 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆25Updated 2 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 2 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Updated last year
- An R package for generating comparative regional association plots☆18Updated 5 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- Pan-transcriptomic phenotyping☆18Updated 3 weeks ago