Alternatives and similar repositories for DumpNice:

Users that are interested in DumpNice are comparing it to the libraries listed below

• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• oeco28 / Cacao_Genomics
  This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes
  ☆11Updated 6 years ago
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆20Updated 6 years ago
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago
• evotools / CattleGraphGenomePaper
  Set of script for the paper on the cattle graph genome
  ☆13Updated 2 years ago
• yexinhai / genomics-analysis-pipeline
  Some useful bioinformatics pipelines for genomics analysis
  ☆14Updated 3 years ago
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆13Updated 4 years ago
• xuechantian / Plant-LncRNA-pipline
  ☆11Updated last month
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• comery / Data-Visulization
  issues for semina "Data Visulization"
  ☆13Updated 2 weeks ago
• oushujun / PopTEvo
  Study of TE evolution in a population of genomes
  ☆9Updated last year
• thomasblankers / popgen
  A collection of scripts I wrote when doing population genetics: calculate GC content, perform the McDonald-Kreitman test, calculate Tajim…
  ☆9Updated last year
• caasivfbioinfo / Bol_pangenome
  ☆14Updated last year
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆23Updated last year
• maiziezhoulab / LRSV_combo
  Long Read Based SV Calling Tools Analysis
  ☆13Updated last year
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆16Updated last year
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago
• zlguu / Rice_Heterosis
  ☆15Updated last year
• xuebozhao16 / VMap1.1-Population_history_of_wheats
  Some codes about evolutionary history of wheats
  ☆8Updated last year
• yiliao1022 / LASTZ_SV_pipeline
  ☆16Updated 5 years ago
• Iceylee / NGS-Pacbio
  Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.
  ☆9Updated 5 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• YinYuan-001 / muntjac_code
  ☆10Updated 3 years ago
• thamala / PBScan
  Selection outlier scan with population branch statistic
  ☆13Updated last year
• jdalapicolla / LanGen_pipeline_version2
  Scripts in R for Landscape Genomics Analyses v.2
  ☆10Updated 2 years ago
• WarrenLab / chicken-pangenome-paper
  Scripts used to perform analyses in Rice et al. (2023)
  ☆15Updated last year
• HuffordLab / Wang_et_al._Demography
  Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"
  ☆17Updated 4 years ago
• LAILAB-CAU / update-Mo17
  ☆24Updated last year
• simonhmartin / dfs
  D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum
  ☆16Updated 4 years ago