cinquin / MEMELinks
MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks
☆11Updated 8 years ago
Alternatives and similar repositories for MEME
Users that are interested in MEME are comparing it to the libraries listed below
Sorting:
- Read, parse and operate different multiple input file formats with OpenVariant☆14Updated 4 months ago
- Blazing fast toolkit to work with .hic and .cool files☆38Updated this week
- Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis☆24Updated 2 weeks ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated 4 months ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- ☆17Updated last month
- ☆19Updated 10 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- Long RNA-seq analysis workflow☆20Updated last week
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated last month
- Rapid and accurate ancestry inference using SNVs.☆26Updated last month
- End-guided RNA assembler☆15Updated last month
- Gapless, reference-quality Southern Han Chinese genome assembly and annotation☆12Updated 2 years ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Updated 9 months ago
- Two pass alignment for long reads☆22Updated 4 years ago
- Scoring GT/AG sites for improving spliced alignment☆45Updated this week
- ☆37Updated 2 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Updated 7 months ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆19Updated 7 months ago
- ☆35Updated last year
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆54Updated 7 months ago
- Analyse RNA feature distributions.☆16Updated 9 months ago
- A python package for showing JBrowse views☆26Updated last year
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 7 months ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 3 years ago