Xinglab / rmats-turboLinks
☆263Updated 7 months ago
Alternatives and similar repositories for rmats-turbo
Users that are interested in rmats-turbo are comparing it to the libraries listed below
Sorting:
- ATAC-seq peak-calling and QC analysis pipeline☆205Updated 3 weeks ago
- Application for making ENCODE Blacklists☆313Updated 4 years ago
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆252Updated 4 months ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆227Updated this week
- Fast and accurate gene fusion detection from RNA-Seq data☆243Updated 2 months ago
- parallel fastq-dump wrapper☆297Updated 2 years ago
- Quick mining and visualization of NGS data by integrating genomic databases☆265Updated 2 years ago
- A short tutorial on how to use RSEM☆136Updated 5 years ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆409Updated last year
- Full-Length Alternative Isoform analysis of RNA☆229Updated last week
- RNA-seq workflow using STAR and DESeq2☆341Updated 10 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆148Updated 9 months ago
- ☆138Updated 6 years ago
- SUPPA: Fast quantification of splicing and differential splicing☆275Updated last year
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆216Updated this week
- Miscellaneous collection of Python and R scripts for processing Iso-Seq data☆269Updated last year
- ☆151Updated 2 years ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆215Updated 2 months ago
- SEACR: Sparse Enrichment Analysis for CUT&RUN☆110Updated 2 years ago
- This Snakemake pipeline implements the GATK best-practices workflow☆254Updated 2 years ago
- Intro to ChIPseq using HPC☆307Updated 2 years ago
- Download FASTQ files from SRA or ENA repositories.☆336Updated last week
- HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.☆250Updated this week
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆161Updated last month
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆215Updated this week
- Detecting sites of genomic enrichment☆192Updated 2 years ago
- STAR-Fusion codebase☆243Updated last month
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆143Updated 2 years ago
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆211Updated last week
- A collection of scripts and notes related to genomics and bioinformatics☆213Updated 2 months ago