☆312Aug 10, 2026Updated last month
Alternatives and similar repositories for rmats-turbo
Users that are interested in rmats-turbo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆163Jun 29, 2026Updated 2 months ago
- SUPPA: Fast quantification of splicing and differential splicing☆308Nov 6, 2025Updated 10 months ago
- ☆38Aug 6, 2026Updated last month
- Command-line tool for the visualization of splicing events across multiple samples☆143Jun 28, 2024Updated 2 years ago
- Visualizing transcript structure and annotation using ggplot2☆171Aug 24, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆136Updated this week
- splicing and feature maps for RBPs☆25Sep 8, 2026Updated 2 weeks ago
- A list of alternative splicing analysis resources☆50Mar 26, 2025Updated last year
- ☆68Mar 19, 2026Updated 6 months ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆281Sep 17, 2026Updated last week
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆68Sep 12, 2023Updated 3 years ago
- Technology agnostic long read analysis pipeline for transcriptomes☆163Jan 25, 2024Updated 2 years ago
- MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation☆140Dec 15, 2022Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆95Apr 29, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12Feb 19, 2021Updated 5 years ago
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆259Sep 2, 2026Updated 3 weeks ago
- Transcript assembly and quantification for RNA-Seq☆534Aug 9, 2026Updated last month
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆36Dec 17, 2021Updated 4 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆18Sep 10, 2024Updated 2 years ago
- Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.☆142Aug 21, 2024Updated 2 years ago
- Full-Length Alternative Isoform analysis of RNA☆257Updated this week
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆68Oct 11, 2024Updated last year
- ☆54Aug 1, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆236Jun 1, 2024Updated 2 years ago
- RNA-seq aligner☆2,255Mar 18, 2025Updated last year
- General Use Scripts and Helper functions☆16Mar 29, 2018Updated 8 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 3 years ago
- A universal toolkit for upstream processing of long RNA reads☆239Sep 18, 2026Updated last week
- ☆17Jul 19, 2024Updated 2 years ago
- ☆60Jul 17, 2025Updated last year
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆290Jul 7, 2026Updated 2 months ago
- 🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment☆932Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆11Feb 16, 2022Updated 4 years ago
- Snakemake pipeline for running MAJIQ☆23Dec 20, 2023Updated 2 years ago
- Mapping Alternative Splicing Events to pRoteins☆21Feb 8, 2022Updated 4 years ago
- polyApipe☆23Feb 10, 2025Updated last year
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆479Aug 7, 2026Updated last month
- Make Complex Heatmaps☆1,556Apr 2, 2026Updated 5 months ago
- Application for making ENCODE Blacklists☆348Apr 23, 2021Updated 5 years ago