Xinglab / rmats-turboLinks
☆275Updated 11 months ago
Alternatives and similar repositories for rmats-turbo
Users that are interested in rmats-turbo are comparing it to the libraries listed below
Sorting:
- ATAC-seq peak-calling and QC analysis pipeline☆213Updated this week
- Application for making ENCODE Blacklists☆324Updated 4 years ago
- parallel fastq-dump wrapper☆299Updated 2 years ago
- SUPPA: Fast quantification of splicing and differential splicing☆281Updated last year
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆266Updated last month
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆240Updated this week
- Detecting sites of genomic enrichment☆194Updated 2 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆227Updated last month
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- RNA-seq workflow using STAR and DESeq2☆346Updated last month
- ☆141Updated 6 years ago
- Full-Length Alternative Isoform analysis of RNA☆237Updated this week
- Quick mining and visualization of NGS data by integrating genomic databases☆266Updated 2 years ago
- Step-by-step analysis pipeline for RNA-seq data☆147Updated 2 years ago
- A collection of scripts and notes related to genomics and bioinformatics☆219Updated 3 weeks ago
- zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs☆286Updated last year
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆225Updated 3 months ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆227Updated last week
- Fast and accurate gene fusion detection from RNA-Seq data☆247Updated last month
- HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.☆256Updated 3 months ago
- ☆153Updated 5 months ago
- ENCODE ChIP-seq pipeline☆274Updated last year
- Intro to ChIPseq using HPC☆315Updated 2 years ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆424Updated last year
- Generate IGV style locus tracks from bigWig files in R☆172Updated 11 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆154Updated last year
- This Snakemake pipeline implements the GATK best-practices workflow☆260Updated 2 years ago
- Download FASTQ files from SRA or ENA repositories.☆344Updated 4 months ago
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆278Updated 2 months ago
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆146Updated 2 years ago