tgen / bisbeeLinks
alternative splicing analysis pipeline
☆20Updated 4 years ago
Alternatives and similar repositories for bisbee
Users that are interested in bisbee are comparing it to the libraries listed below
Sorting:
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- ☆38Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- Long read to rMATS☆32Updated 2 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 9 months ago
- ☆38Updated last year
- ☆24Updated last year
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 4 months ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 3 weeks ago
- Workflow for Sequenza, cellularity and ploidy☆25Updated 4 months ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆28Updated 3 years ago
- ☆34Updated last month
- ☆21Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- ☆23Updated 4 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆55Updated last year
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- A script to make downloading of SRA/GEO data easier☆33Updated 2 years ago
- SingleCell Nanopore sequencing data analysis☆62Updated 7 months ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Updated 2 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆70Updated 2 weeks ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆23Updated last year
- ☆20Updated 3 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Updated 9 months ago
- ☆13Updated 3 years ago
- LIONS is a bioinformatic analysis pipeline which brings together a few pieces of software and some home-brewed scripts to annotate a p…☆30Updated 5 years ago