tgen / bisbeeLinks
alternative splicing analysis pipeline
☆20Updated 4 years ago
Alternatives and similar repositories for bisbee
Users that are interested in bisbee are comparing it to the libraries listed below
Sorting:
- Long read to rMATS☆32Updated 2 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 2 months ago
- Workflow for Sequenza, cellularity and ploidy☆26Updated 5 months ago
- ☆38Updated last year
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆29Updated 3 years ago
- ☆24Updated last year
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- ☆38Updated 2 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 10 months ago
- ☆20Updated 3 years ago
- ☆13Updated 3 years ago
- for visual evaluation of read support for structural variation☆56Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Updated 2 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- LIONS is a bioinformatic analysis pipeline which brings together a few pieces of software and some home-brewed scripts to annotate a p…☆30Updated 5 years ago
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Updated 2 years ago
- ☆34Updated 2 months ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Updated 3 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- isoCirc☆10Updated 2 years ago
- CADD-SV – a framework to score the effect of structural variants☆18Updated last week
- A script to make downloading of SRA/GEO data easier☆33Updated 2 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆58Updated last year
- SingleCell Nanopore sequencing data analysis☆63Updated 8 months ago
- Automatised pipeline of ConsensuSV workflow.☆24Updated 2 years ago