Detecting Aberrant Splicing Events from RNA-sequencing data
☆16Dec 10, 2024Updated last year
Alternatives and similar repositories for dasper
Users that are interested in dasper are comparing it to the libraries listed below
Sorting:
- FRASER - Find RAre Splicing Events in RNA-seq☆53Feb 11, 2026Updated 3 weeks ago
- ☆18May 31, 2024Updated last year
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Sep 29, 2025Updated 5 months ago
- Visualizing transcript structure and annotation using ggplot2☆165Aug 24, 2024Updated last year
- A pipeline creation tool using Snakemake☆12Feb 20, 2026Updated last week
- ☆11Aug 21, 2024Updated last year
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Nov 20, 2025Updated 3 months ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆29May 19, 2017Updated 8 years ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 5 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆13Oct 7, 2025Updated 4 months ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆36Nov 12, 2025Updated 3 months ago
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 4 years ago
- Efficiently compute robust markers across single-cell datasets☆12Apr 21, 2021Updated 4 years ago
- RNAseq pipeline for alternative splicing junctions☆14Apr 23, 2025Updated 10 months ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Sep 15, 2023Updated 2 years ago
- web based visualisation of CLMS data☆13Nov 22, 2022Updated 3 years ago
- Package to calculate functional similarity between genes https://biocor.llrs.dev☆14Oct 20, 2025Updated 4 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Jul 1, 2024Updated last year
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆14Oct 28, 2025Updated 4 months ago
- Automated Detection and Qualification of Differential Methylation☆16Nov 21, 2023Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Mar 7, 2022Updated 3 years ago
- R package for querying the OMIM database☆17Sep 14, 2025Updated 5 months ago
- ☆16Sep 13, 2024Updated last year
- Source code of the R packge BgeeDB to use data from the Bgee database☆16Oct 8, 2025Updated 4 months ago
- An R package to plot interactive three-way differential expression analysis☆38Jan 14, 2026Updated last month
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Splicing Prediction Pipeline☆14Aug 12, 2023Updated 2 years ago
- DolphinNext Tutorial documents☆16Jul 5, 2021Updated 4 years ago
- Splice junction analysis and filtering from BAM files☆41Mar 31, 2022Updated 3 years ago
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 2 years ago
- alternative splicing analysis pipeline☆20Apr 9, 2021Updated 4 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Sep 5, 2023Updated 2 years ago