ChongLab / InspectorLinks
A tool for evaluate long-read de novo assembly results
☆48Updated last year
Alternatives and similar repositories for Inspector
Users that are interested in Inspector are comparing it to the libraries listed below
Sorting:
- TSEBRA: Transcript Selector for BRAKER☆48Updated 10 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- A tool for evaluating long-read de novo assembly results☆46Updated last year
- Call select base modifications in PacBio HiFi reads☆13Updated 8 months ago
- Identification of transposable element families from pangenome polymorphisms☆53Updated 4 months ago
- ☆66Updated last month
- ☆33Updated 4 years ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- TGS scaffolding☆47Updated 3 years ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- Multi-genome synteny block visualization tool☆47Updated 8 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆44Updated 5 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆37Updated 2 years ago
- ☆44Updated 8 years ago
- Show pangenome graphs in an easy way☆56Updated 2 months ago
- Draw a dot plot from a paf alignment☆34Updated 3 weeks ago
- A genome assembly assessment pipeline.☆37Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- ☆30Updated 9 months ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆37Updated 2 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 8 months ago
- Genome Annotation Pipeline☆36Updated last year
- ☆78Updated 5 years ago
- finshingTool☆54Updated 8 years ago
- A organelle de novo genome assembly toolkit☆69Updated 7 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- A program for assessing the T2T genome continuity☆87Updated 3 weeks ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆51Updated 2 months ago