LaoZZZZZ / bartender-1.1
This bartender version could handle arbitrary length of barcode
☆28Updated 10 months ago
Related projects ⓘ
Alternatives and complementary repositories for bartender-1.1
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆47Updated 4 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 6 months ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆41Updated last month
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Updated 3 years ago
- SingleCell Nanopore sequencing data analysis☆52Updated last month
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 6 months ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- Maximum likelihood demultiplexing☆46Updated last year
- Digenome-toolkit ver2.☆15Updated 3 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆56Updated last month
- Snakemake-based workflow for detecting structural variants in genomic data☆77Updated 9 months ago
- Tip and tricks for BAM files☆84Updated 6 years ago
- Fully automated generation of UCSC assembly hubs☆34Updated last month
- Merging paired-end reads and removing adapters☆45Updated 4 years ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- PHAST☆68Updated this week
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆67Updated 8 months ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated last month
- Materials for Spring 2021 Applied Genomics Course☆52Updated 3 years ago
- Evolutionary Transcriptomics with R☆41Updated this week
- A software for calculating telomere length☆67Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆41Updated 2 years ago
- ☆29Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆36Updated 2 years ago
- processing 10x genomics reads☆24Updated 5 years ago
- Pair-End AssembeR☆25Updated 10 years ago
- A Python library to visualize and analyze long-read transcriptomes☆57Updated 8 months ago
- ☆46Updated 2 weeks ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆23Updated 2 months ago