toolkit for analyzing genome editing experiments
☆21May 15, 2026Updated last month
Alternatives and similar repositories for knock-knock
Users that are interested in knock-knock are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆73Aug 19, 2023Updated 2 years ago
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- Repository for PlateEditor, the web application allowing management of plate layout, results visualization and analysis☆22Dec 5, 2025Updated 6 months ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆28Jul 28, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 7 years ago
- This BLENDER has been sunsetted☆16Sep 27, 2024Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆29Feb 6, 2025Updated last year
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- BAGEL software☆28Jan 30, 2024Updated 2 years ago
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆21May 2, 2022Updated 4 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- This bartender version could handle arbitrary length of barcode☆33Jan 6, 2024Updated 2 years ago
- Source code for integrative nonnegative matrix factorization☆19Jul 12, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- R package with functions as described in thats-so-random.com☆13Jan 14, 2020Updated 6 years ago
- ☆16Nov 5, 2021Updated 4 years ago
- Analyses related to the Borzoi paper.☆29Dec 14, 2025Updated 6 months ago
- Co-expression network management based on WGCNA + k-means☆22May 11, 2021Updated 5 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆342May 14, 2026Updated last month
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 2 months ago
- ☆35Feb 11, 2026Updated 4 months ago
- Implementation of TriMap dimensionality reduction in PyTorch☆16May 26, 2018Updated 8 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Jun 5, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Dec 15, 2021Updated 4 years ago
- Bioinformatics code for paper associated with deep diversification of AAV☆41Nov 27, 2024Updated last year
- integrated RNA-seq Analysis Pipeline☆84Feb 6, 2019Updated 7 years ago
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 4 years ago
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problems☆19Nov 22, 2024Updated last year
- ☆15May 12, 2023Updated 3 years ago
- Contains sample scripts and code to be used with LabKey Server☆11Feb 19, 2026Updated 3 months ago
- Reusable tools for working with next-generation sequencing (NGS) data☆12Oct 7, 2024Updated last year
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Biomark Fluidigm qPCR data set: processing and analysis☆11Apr 8, 2024Updated 2 years ago
- flexible barcode and adapter removal☆81Feb 10, 2023Updated 3 years ago
- Manuscript describing software for the automated revision of manubot manuscripts.☆16Jun 20, 2024Updated last year
- micro-read Fast Alignment Search Tool☆20Jul 19, 2019Updated 6 years ago
- Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products☆36May 4, 2026Updated last month
- Converts a graph into vector field texture☆23Apr 26, 2025Updated last year
- A flexible tool for defining the contents of 96 well plates.☆52May 23, 2026Updated 3 weeks ago