Tools for munging genomic data
☆21Jul 9, 2019Updated 7 years ago
Alternatives and similar repositories for genemunge
Users that are interested in genemunge are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 8 years ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- ☆15May 22, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Supplementary information to "Computational correction of index switching in multiplexed sequencing libraries" (Larsson et. al 2018).☆15Nov 3, 2020Updated 5 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- a flexible tool for microsatellite investigation and visualization☆10Jun 15, 2026Updated 2 months ago
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Aug 9, 2019Updated 7 years ago
- Probabilistic Classifier Chains (PCC) algorithm solving the problem of Multi-Label Classification. For more information see: Krzysztof De…☆15Jun 25, 2018Updated 8 years ago
- MyChem.info: A BioThings API for chemical/drug annotations☆20Updated this week
- Kipoi's model zoo API☆243Dec 17, 2025Updated 8 months ago
- reference implementation of GA4GH WGS Quality Control Standards☆12Nov 25, 2025Updated 9 months ago
- Simulation and inference of gene regulatory networks based on transcriptional bursting☆13Apr 17, 2026Updated 4 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆10Sep 27, 2022Updated 3 years ago
- Find and characterise transposable element insertions☆21May 26, 2023Updated 3 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- Proteins as words, genomes as documents.☆19Nov 11, 2020Updated 5 years ago
- ☆11May 3, 2022Updated 4 years ago
- A long read simulator based on badread idea☆23Oct 7, 2022Updated 3 years ago
- A PostgreSQL foreign data wrapper for VCF files.☆18May 8, 2017Updated 9 years ago
- Flexible guide to performing code review☆10Jul 17, 2017Updated 9 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Efficiently read and write sequencing data from Python☆71Oct 12, 2025Updated 10 months ago
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 4 years ago
- Normal Mode Analysis for Macromolecules☆18Apr 1, 2017Updated 9 years ago
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆31Jan 22, 2026Updated 7 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆37Aug 4, 2022Updated 4 years ago
- The Dazzler Data Base☆36Feb 17, 2025Updated last year
- AWS lambda S3 + rust-htslib: A serverless bioinformatics example☆14Jun 7, 2022Updated 4 years ago
- Day 2 of ACAD's 2018 Advanced Bioinformatics Workshop☆12Nov 27, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 📮 A server that provides you an infinite number of mailboxes that you can check via a REST API☆14Mar 25, 2022Updated 4 years ago
- Model zoo for genomics☆175Dec 17, 2025Updated 8 months ago
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago