Alternatives and similar repositories for freebarcodes

Users that are interested in freebarcodes are comparing it to the libraries listed below

• Seeliglab / 2017---Deep-learning-yeast-UTRs
  Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"
  ☆16Updated 8 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated last year
• GreiffLab / immuneSIM
  ☆38Updated 2 years ago
• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆54Updated 5 years ago
• psathyrella / partis
  B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction
  ☆62Updated this week
• vagarwal87 / saluki_paper
  Saluki, a method to predict mRNA half-lives from sequence
  ☆27Updated 3 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated 2 years ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆44Updated 3 weeks ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆34Updated 2 months ago
• g-kl / seqwalk
  Efficient algorithms for designing orthogonal DNA sequence libraries
  ☆13Updated last year
• RTH-tools / crisproff
  off-targeting assessment of Cas9 gRNAs
  ☆15Updated 4 years ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆28Updated last month
• goodarzilab / SwitchFinder
  ☆20Updated last year
• betteridiot / seqlogo
  Python port of the R Bioconductor `seqLogo` package
  ☆35Updated 2 weeks ago
• feldman4 / dna-barcodes
  Generate robust DNA barcode sets
  ☆33Updated 2 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆47Updated 9 years ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated 2 years ago
• pachterlab / qcbc
  ☆20Updated 8 months ago
• mikessh / migmap
  HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
  ☆53Updated last year
• brineylab / grp-paper
  Code and data used in The Great Repertoire Project
  ☆29Updated 4 years ago
• shendurelab / MPRAflow
  A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data
  ☆35Updated last year
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆27Updated 2 years ago
• rraadd88 / beditor
  A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
  ☆19Updated last year
• labomics / MetaLogo
  MetaLogo: a heterogeneity-aware sequence logo generator and aligner
  ☆21Updated 2 years ago
• athchen / beer
  Bayesian enrichment estimation in R
  ☆11Updated 2 months ago
• maxwellsh / DIGDriver
  Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.
  ☆26Updated 3 years ago
• CRISPRJWCHOI / CRISPR_toolkit
  CRISPR Indel, base edit analysis
  ☆11Updated 5 years ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆46Updated 2 years ago
• uclahs-cds / package-moPepGen
  Multi-Omics Peptide Generator
  ☆30Updated 3 months ago
• bcgsc / ntEmbd
  Deep learning embedding for nucleotide sequences
  ☆19Updated 10 months ago