classification of higher-order structural variants from breakpoint data
☆11Jan 8, 2018Updated 8 years ago
Alternatives and similar repositories for clove
Users that are interested in clove are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)☆14Dec 7, 2016Updated 9 years ago
- R package with Shiny application for DGE analysis☆12Jan 8, 2024Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Apr 13, 2020Updated 5 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- A clone of the official AMOS git repo on sourceforge: https://sourceforge.net/projects/amos/☆18Nov 15, 2012Updated 13 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Flexible Bayesian inference of mutational signatures☆41Jan 30, 2023Updated 3 years ago
- ☆14Oct 3, 2017Updated 8 years ago
- A machine learning-based genotyping tool for structural variation in short reads☆26Sep 15, 2025Updated 6 months ago
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆17Oct 14, 2024Updated last year
- interactive Multi Objective K-mer Analysis☆24Mar 5, 2023Updated 3 years ago
- Toolkit for automated and rapid discovery of structural variants☆24Aug 24, 2023Updated 2 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 6 years ago
- Genotyping of segregating mobile elements insertions☆19Jul 29, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆51Aug 27, 2019Updated 6 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Jun 30, 2017Updated 8 years ago
- R package designed to simplify structural variant analysis☆74Dec 22, 2021Updated 4 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Aug 16, 2023Updated 2 years ago
- Python package and routines for merging VCF files☆29Apr 1, 2021Updated 4 years ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆264Jun 17, 2024Updated last year
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Dec 6, 2018Updated 7 years ago
- new repo☆28May 18, 2021Updated 4 years ago
- Random ipv6 egress proxy server (support http/socks5)☆42Jan 15, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 12 years ago
- Convert HAL to VG☆23Aug 12, 2024Updated last year
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 3 years ago
- Population-scale genotyping using pangenome graphs☆197Jan 9, 2025Updated last year
- ☆14Oct 27, 2025Updated 4 months ago
- Website for Computational Exome and Genome Analysis☆20Jul 30, 2019Updated 6 years ago
- Python library & CLI to create, view and edit PFB files☆12Feb 19, 2026Updated last month
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated last year
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆282May 21, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Method to optimally select samples for validation and resequencing☆30Apr 6, 2021Updated 4 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆27Nov 14, 2025Updated 4 months ago
- Allele-specific copy number estimation with whole genome sequencing☆23Nov 10, 2023Updated 2 years ago
- Scripts for homology and orthology assessment from genomic sequences.☆19Oct 5, 2020Updated 5 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Dec 10, 2024Updated last year
- An easy way to run BioNano genomic analysis☆28Apr 9, 2021Updated 4 years ago
- This bartender version could handle arbitrary length of barcode☆33Jan 6, 2024Updated 2 years ago