10XGenomics / orbit
Rust wrapper for STAR aligner
☆15Updated this week
Related projects ⓘ
Alternatives and complementary repositories for orbit
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆14Updated last month
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆29Updated 6 months ago
- Efficient querying of biological databases☆28Updated this week
- Single-Cell RNA-seq pseudo-aligner☆50Updated 6 months ago
- Rust wrapper of the BWA C API☆18Updated 3 years ago
- fast, reliable and handy demultiplexing tool for fastx files☆14Updated 7 months ago
- Fast interval intersection library☆22Updated this week
- Toolkit for manipulating FASTA and SAM files☆17Updated 8 months ago
- Fast and flexible tool for reading, modifying and writing biological sequences☆17Updated 2 months ago
- ☆22Updated 2 years ago
- Rust UMI Directional Adjacency Deduplicator☆14Updated 4 years ago
- Bioinformatics Algorithms implemented in Rust for Learners☆30Updated 3 years ago
- ☆17Updated 4 months ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- Single-cell analysis methods in Rust☆15Updated 5 months ago
- Rust utility code☆32Updated 9 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated 4 months ago
- bgzip support for Rust☆14Updated last year
- BUS format specification☆13Updated 5 years ago
- ☆47Updated 2 years ago
- Alignment-based gene expression quantification☆26Updated 5 months ago
- De Bruijn graphs in Rust☆63Updated 4 months ago
- A tool to annotate human VCF files with PolyPhen2 effect measures☆9Updated last year
- Fasten toolkit, for streaming operations on fastq files☆76Updated 9 months ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Updated 8 years ago
- A high-performance BigWig and BigBed library in Rust☆71Updated last week
- gia: Genomic Interval Arithmetic☆51Updated 3 months ago
- bioinformatics toolkit in rust☆78Updated 6 months ago
- FASTA and FASTQ parsing in Rust☆72Updated 11 months ago