ESTIMATE tumor infiltration, the tidy way
☆18Aug 22, 2023Updated 2 years ago
Alternatives and similar repositories for tidyestimate
Users that are interested in tidyestimate are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 3 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 4 years ago
- ☆16Jun 27, 2025Updated 9 months ago
- Source code and data for "Pan-cancer analysis of bi-allelic alterations in homologous recombination (HR) DNA repair genes" ; See manuscri…☆13May 26, 2017Updated 8 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Aug 9, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆16Nov 2, 2020Updated 5 years ago
- ☆12Sep 24, 2020Updated 5 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Long disorder consensus predictor☆23Sep 2, 2025Updated 7 months ago
- ☆25Jan 18, 2022Updated 4 years ago
- ☆13Apr 22, 2021Updated 4 years ago
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆24Oct 31, 2017Updated 8 years ago
- Introduction to single-cell RNA-Seq analysis workshop☆15Feb 1, 2017Updated 9 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆29Jul 27, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Jun 21, 2017Updated 8 years ago
- ☆23Nov 11, 2024Updated last year
- ☆10Dec 4, 2019Updated 6 years ago
- A software package for detection of copy number alterations from tumor samples☆12May 8, 2015Updated 10 years ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Dec 16, 2019Updated 6 years ago
- Using Biopython's Bio.Entrez package to Access NCBI Entrez databases☆16Jun 26, 2014Updated 11 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 9 years ago
- various sources and scripts for genomic research software☆10May 11, 2015Updated 10 years ago
- R implementation of Robust Rank Aggregation algortihm☆11Jun 8, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆21Feb 14, 2024Updated 2 years ago
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Updated this week
- ☆12Apr 2, 2021Updated 5 years ago
- ☆10Jun 14, 2025Updated 10 months ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆13Jan 27, 2023Updated 3 years ago
- transposable element typing pipeline☆19Mar 8, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for tissue-specific gene enrichment☆16Mar 10, 2022Updated 4 years ago
- ☆10Jul 13, 2022Updated 3 years ago
- Python interface for the Stan to (Num)Pyro compiler.☆14Oct 20, 2021Updated 4 years ago
- ☆10Apr 30, 2019Updated 6 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Jun 10, 2022Updated 3 years ago
- ☆49Feb 14, 2024Updated 2 years ago
- The source code of our DCB algorithm in KDD17 paper: Estimating Treatment Effect in the Wild via Differentiated Confounder Balancing☆10Jun 25, 2018Updated 7 years ago