broadinstitute / flipbook
A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.
☆19Updated 3 months ago
Related projects: ⓘ
- TRGT Repeat expansion summary☆10Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆23Updated 4 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆28Updated last year
- Structural variant benchmark of challenging medically relevant genes☆16Updated last year
- Location of public benchmarking; primarily final results☆18Updated 2 years ago
- De novo tandem repeat calling from PacBio HiFi data☆12Updated 3 weeks ago
- VNTR annotation using motif selection☆28Updated 3 weeks ago
- Structural variant (SV) analysis tools☆36Updated 2 months ago
- Variant annotation and merging pipeline☆26Updated 3 weeks ago
- Working space for the GIAB TR benchmarking project☆20Updated 4 months ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆15Updated 5 months ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 2 years ago
- ☆19Updated 5 months ago
- ☆29Updated 2 years ago
- Segmental Duplication Assembler (SDA).☆44Updated last year
- A module for improving the insertion sequences of structural variant calls☆28Updated 3 years ago
- A VCF comparison engine for structual variant benchmarking☆18Updated 5 months ago
- ☆38Updated last week
- ☆21Updated 4 years ago
- Population-wide Deletion Calling☆34Updated 2 weeks ago
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆31Updated 4 years ago
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆18Updated last week
- Tumour-only somatic mutation calling using long reads☆22Updated 6 months ago
- A new tool to infer sex from massively parallel sequencing data.☆14Updated 3 months ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆32Updated 2 years ago
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆18Updated 9 months ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆44Updated 3 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 2 years ago
- SV genotyping with long reads☆40Updated last year
- Structural variant caller☆53Updated 2 years ago