hammerlab / multi-omic-urothelial-anti-pdl1Links
Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis
☆22Updated 7 years ago
Alternatives and similar repositories for multi-omic-urothelial-anti-pdl1
Users that are interested in multi-omic-urothelial-anti-pdl1 are comparing it to the libraries listed below
Sorting:
- ☆29Updated 6 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- ☆40Updated 7 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆43Updated 7 months ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 10 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- a computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data☆18Updated 4 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 4 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- Explore the cancer relevance of your gene list☆51Updated 4 months ago
- ☆25Updated 4 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Updated 4 years ago
- ☆23Updated last month
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- R package with motifs for use with chromVAR☆28Updated 7 years ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆18Updated last month
- Single-cell Case Control Analysis☆49Updated 7 months ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago