Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis
☆24Oct 31, 2017Updated 9 years ago
Alternatives and similar repositories for multi-omic-urothelial-anti-pdl1
Users that are interested in multi-omic-urothelial-anti-pdl1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆54Feb 12, 2018Updated 8 years ago
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆17Jun 29, 2018Updated 8 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- ☆41Apr 16, 2018Updated 8 years ago
- ☆12Dec 5, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆30Jul 8, 2018Updated 8 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Jan 28, 2022Updated 4 years ago
- 📝 [Tutorial] RepSeq data mining basics in R☆10Mar 13, 2019Updated 7 years ago
- code and data for Liu, Schilling, et al Nat Med 2019☆18Aug 1, 2024Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Aug 30, 2019Updated 7 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 6 years ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- ☆14Apr 22, 2021Updated 5 years ago
- A framework to infer mutational signatures in cancer over time☆57Jul 9, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 5 years ago
- ☆11Dec 4, 2019Updated 6 years ago
- R scripts used for MYC analyses☆10Jan 30, 2018Updated 8 years ago
- Python function for TMB snake plots☆16Feb 12, 2026Updated 8 months ago
- hands-on for NGS/SNParray CNV call trainning☆19Jun 13, 2022Updated 4 years ago
- ☆12Apr 26, 2020Updated 6 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆48Mar 6, 2026Updated 8 months ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An R Interface to the ImmuneSpace database portal☆24Nov 28, 2023Updated 2 years ago
- Source code and data for "Pan-cancer analysis of bi-allelic alterations in homologous recombination (HR) DNA repair genes" ; See manuscri…☆13May 26, 2017Updated 9 years ago
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆118Sep 2, 2024Updated 2 years ago
- CellNet, for cancer☆11Jul 14, 2022Updated 4 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆74Jul 26, 2018Updated 8 years ago
- 是基础也是综合(一系列对象及函数，需要细致的讲解)☆30Apr 9, 2016Updated 10 years ago
- ISOform-guided prediction of epiTOPEs in cancer☆13Apr 10, 2023Updated 3 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- ☆17Jan 9, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Mollecular Functional Portraits☆45Apr 3, 2024Updated 2 years ago
- Slides for my RLadies NYC Presentation☆11Feb 27, 2020Updated 6 years ago
- Code for comparing the top 10 predictors to the lasso/debiased lasso☆12Jan 23, 2014Updated 12 years ago
- Inferring selection in cancer sequencing data using ABC and population based simulations☆11Jan 31, 2021Updated 5 years ago
- ☆10Sep 15, 2021Updated 5 years ago
- An R package to interpret biological trends from DNA methylation data☆17May 24, 2022Updated 4 years ago
- An R package to time somatic mutations☆73Dec 12, 2020Updated 5 years ago