Variant call adjudication
☆16Jun 13, 2024Updated last year
Alternatives and similar repositories for minos
Users that are interested in minos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome inference from a population reference graph☆96Apr 1, 2025Updated 11 months ago
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- CRyPTIC data processing pipelines☆34Jul 18, 2024Updated last year
- Simple-to-use interactive comparison of two bacterial genomes☆26Jan 30, 2026Updated last month
- A collection of CSV/TSV Utilities☆13Jun 2, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆14Jun 12, 2024Updated last year
- Antibiotic resistance prediction in minutes☆114Nov 24, 2024Updated last year
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 2, 2026Updated 3 weeks ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆32Aug 18, 2025Updated 7 months ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- Simple and transparent support for compressed files.☆81Feb 27, 2026Updated last month
- Hidden Markov Model based Copy number caller☆20Dec 9, 2025Updated 3 months ago
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆21Jan 4, 2026Updated 2 months ago
- Antibiotic resistance predictions in minutes on a laptop☆50Mar 7, 2019Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- VariantStore: A Large-Scale Genomic Variant Search Index☆39Jul 9, 2021Updated 4 years ago
- Importing vg json graphs to Python data structures.☆12Nov 11, 2020Updated 5 years ago
- SARS-CoV-2 Deep Sequencing☆14Apr 22, 2020Updated 5 years ago
- Variant call verification☆16May 12, 2025Updated 10 months ago
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- A versatile toolkit for k-mers with taxonomic information☆82Aug 28, 2025Updated 6 months ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆20Nov 24, 2024Updated last year
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Nov 6, 2025Updated 4 months ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Toolkit for extracting SVs from long sequences and benchmarking variant callers☆13Jan 10, 2017Updated 9 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Unfazed by genomic variant phasing☆27May 26, 2024Updated last year
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Aug 13, 2024Updated last year
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)☆14Aug 25, 2017Updated 8 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆143Aug 24, 2025Updated 7 months ago
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 10 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Bifrost graph gene caller.☆98Jan 20, 2026Updated 2 months ago
- ☆21Dec 26, 2025Updated 3 months ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- sunburst plots for taxonomy - working to update Krona☆44Sep 22, 2025Updated 6 months ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- A toolkit for quality control & adjustment of nucleotide redundancy in bacterial pan-genome analyses☆21Feb 12, 2026Updated last month
- Sample Contamination Estimate from VCF☆20Nov 6, 2024Updated last year