☆23Nov 11, 2024Updated last year
Alternatives and similar repositories for stCancer
Users that are interested in stCancer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- <Bioinformatics> scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution☆27Aug 27, 2025Updated 8 months ago
- a user-friendly and modular design R package tailored for analyzing single-cell and spatial transcriptome sequencing data of hematopoieti…☆18Apr 17, 2025Updated last year
- BulkSignalR☆27Mar 30, 2026Updated last month
- A package for automated processing of single cell RNA-seq data in cancer☆117Aug 27, 2025Updated 8 months ago
- ☆51Feb 16, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- ☆33Jul 17, 2021Updated 4 years ago
- Codes for the scPLC project☆75Dec 2, 2022Updated 3 years ago
- Spatial Cellular Estimator for Tumors☆63May 5, 2026Updated 2 weeks ago
- ☆16Jan 24, 2023Updated 3 years ago
- ☆17Sep 17, 2025Updated 8 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Aug 17, 2022Updated 3 years ago
- ESTIMATE tumor infiltration, the tidy way☆18Aug 22, 2023Updated 2 years ago
- bioinformatics R test code☆14Mar 29, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Spatial Transcriptomic Analysis of OSCC samples☆28Dec 24, 2025Updated 4 months ago
- Multiple trajectory alignment of time-series data☆13Oct 14, 2023Updated 2 years ago
- ☆113Sep 16, 2020Updated 5 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆48Apr 8, 2022Updated 4 years ago
- 单细胞转录组实战☆13Jul 9, 2019Updated 6 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 5 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Oct 6, 2021Updated 4 years ago
- ☆22Nov 9, 2023Updated 2 years ago
- ☆129Mar 27, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Wrappers for easier generative biology workflows☆20Sep 17, 2025Updated 8 months ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆17Nov 30, 2024Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Nov 25, 2024Updated last year
- ☆20Jan 16, 2026Updated 4 months ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆154Jan 6, 2021Updated 5 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆44Mar 3, 2017Updated 9 years ago
- ☆21Jul 14, 2022Updated 3 years ago
- ☆32Jan 3, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆136Apr 24, 2024Updated 2 years ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆23May 20, 2023Updated 3 years ago
- ☆16Dec 11, 2018Updated 7 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Mar 26, 2026Updated last month
- ☆30Jul 15, 2021Updated 4 years ago
- Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in t…☆22Aug 19, 2022Updated 3 years ago
- ☆29Jan 4, 2024Updated 2 years ago