DCGenomics / DangerTrack
☆13Updated 7 years ago
Alternatives and similar repositories for DangerTrack:
Users that are interested in DangerTrack are comparing it to the libraries listed below
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 5 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Haplotype-based somatic genome simulator☆10Updated 7 years ago
- Structural variation and indel detection using rolling local string graph assembly☆9Updated 8 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.☆20Updated 6 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- Hemang Parikh☆11Updated 9 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Updated 3 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated last year
- Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)☆14Updated 7 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 5 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Updated 7 years ago
- Allele frequency filtering for Mendelian variant discovery☆17Updated 8 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- ☆11Updated 6 years ago
- ☆12Updated last week
- ☆12Updated 3 years ago
- Run multiple programs to check if a VCF is usable☆11Updated 4 years ago
- Hidden Markov Model based Copy number caller☆20Updated 6 months ago
- Allele frequency filter app☆14Updated 3 years ago
- R tools to interact with hap.py output☆15Updated 5 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- extract SV signal from a BAM☆11Updated 6 years ago
- Pan gGnome Viewer☆10Updated last year
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆18Updated last month