XWangLabTHU / DISMIR
☆23Updated 3 years ago
Alternatives and similar repositories for DISMIR:
Users that are interested in DISMIR are comparing it to the libraries listed below
- ☆28Updated last year
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆17Updated 5 years ago
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated 8 months ago
- Fork of the Polysolver project☆31Updated 5 years ago
- Main repository for Drews et al. (Nature, 2022)☆39Updated last year
- A flexible framework for nucleosome profiling of cell-free DNA☆27Updated last year
- Package for calculation of Homologous Recombination Deficiency☆13Updated 4 years ago
- MutSig2CV from Lawrence et al. 2014☆31Updated 4 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆19Updated 4 years ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆30Updated last year
- Clonality Inference in Multiple Tumor Samples using Phylogeny☆14Updated 9 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆51Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Clonality inference in multiple tumor samples using phylogeny☆13Updated 7 years ago
- ☆11Updated last year
- ☆33Updated 2 years ago
- direct comparison of circular and linear RNA expression☆21Updated 4 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆19Updated 5 years ago
- ☆38Updated 5 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆42Updated this week
- Spatial Computational Inference of MEtastatic Timing (SCIMET)☆14Updated 5 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- ☆43Updated 6 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- RNA editing tests☆17Updated 4 years ago
- documentation for trackViewer☆29Updated 5 years ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆27Updated 4 years ago
- An R package to time somatic mutations☆61Updated 4 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 4 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆63Updated 2 years ago