Alternatives and similar repositories for TCGA_GTEx

Users that are interested in TCGA_GTEx are comparing it to the libraries listed below

• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆37Updated 5 years ago
• xjsun1221 / tinyarray
  plots function for array
  ☆99Updated last year
• HuangLabUMN / oncoPredict
  An R package for drug response prediction and drug-gene association prediction.
  ☆26Updated 8 months ago
• xlucpu / MOVICS
  Multi-Omics integration and VIsualization in Cancer Subtyping
  ☆145Updated 4 years ago
• jmzeng1314 / mouse-xx-xy-C1
  ☆18Updated 6 years ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆82Updated 2 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆28Updated 2 years ago
• YutingPKU / SingleCell-Multiomics
  ☆71Updated 3 years ago
• jmzeng1314 / gtex_BRCA
  ☆16Updated 6 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆66Updated 2 years ago
• BioinformaticsFMRP / PanCanStem_Web
  ☆33Updated 4 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• AweKevin / TIIClnc
  Machine learning-based identification of tumor-infiltrating immune cell-associated lncRNAs for improving outcomes and immunotherapy respo…
  ☆14Updated 3 years ago
• jmzeng1314 / AnnoProbe
  ☆112Updated 3 years ago
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆65Updated 4 years ago
• bischofp / single_cell_lung_adenocarcinoma
  ☆32Updated 3 years ago
• genecell / COSGR
  Accurate and fast cell marker gene identification with COSG
  ☆62Updated 3 years ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆69Updated 4 months ago
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆93Updated 2 years ago
• Moonerss / CIBERSORT
  ☆43Updated last month
• ycl6 / StackedVlnPlot
  Create stacked violin plot
  ☆51Updated 3 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆80Updated last year
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆20Updated 6 years ago
• 123anjuan / HMA
  Human Muscle Ageing Cell Atlas
  ☆20Updated last year
• bioconductor-china / basic
  是基础也是综合(一系列对象及函数，需要细致的讲解)
  ☆30Updated 9 years ago
• Zaoqu-Liu / SurvivalML
  Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors
  ☆43Updated 9 months ago
• KChen-lab / METAFlux
  ☆81Updated last year
• hedyBao / HNSCC_scRNA
  ☆41Updated last year
• Coolgenome / iTALK
  ☆65Updated 6 years ago
• tjhwangxiong / TCGAplot
  A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…
  ☆124Updated 9 months ago