KChen-lab / MonopogenLinks
SNV calling from single cell sequencing
☆104Updated 8 months ago
Alternatives and similar repositories for Monopogen
Users that are interested in Monopogen are comparing it to the libraries listed below
Sorting:
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- Basic workflow for ATAC-seq analysis☆81Updated last year
- mgatk: mitochondrial genome analysis toolkit☆108Updated 5 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆78Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆50Updated 11 months ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆67Updated last week
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Links to ATAC-seq analysis tools☆68Updated 3 years ago
- ☆86Updated 4 years ago
- Analysis pipeline for ATAC-seq Data☆61Updated 3 years ago
- ☆108Updated last year
- Efficient genotyping bi-allelic SNPs on single cells☆145Updated last year
- ☆32Updated last year
- ☆76Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆52Updated 3 years ago
- ☆74Updated 2 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated last month
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- Tools for single-cell data processing☆125Updated last year
- Analysis of Paired-Tag datasets☆42Updated last year
- ☆95Updated last week
- Analysis pipeline for ATAC-seq data☆63Updated last year
- CUT&RUN and CUT&Tag data processing and analysis☆110Updated 4 months ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆101Updated 2 weeks ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆31Updated 2 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 8 months ago
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- ☆68Updated last year
- single-cell clustering based on alternative splicing landscapes☆21Updated last year