KChen-lab / MonopogenLinks
SNV calling from single cell sequencing
☆100Updated 7 months ago
Alternatives and similar repositories for Monopogen
Users that are interested in Monopogen are comparing it to the libraries listed below
Sorting:
- ☆107Updated last year
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆98Updated 2 months ago
- Analysis pipeline for ATAC-seq data☆61Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- Basic workflow for ATAC-seq analysis☆80Updated last year
- ☆92Updated this week
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆58Updated last month
- Tools for single-cell data processing☆125Updated last year
- ☆81Updated last year
- Analysis pipeline for ATAC-seq Data☆61Updated 3 years ago
- mgatk: mitochondrial genome analysis toolkit☆108Updated 5 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 3 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆52Updated 3 years ago
- Links to ATAC-seq analysis tools☆68Updated 3 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆67Updated last week
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆107Updated 2 months ago
- ☆86Updated 4 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Analysis of Paired-Tag datasets☆42Updated last year
- ☆68Updated last year
- ☆110Updated 3 months ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆68Updated 7 months ago
- Tutorial Website☆59Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆83Updated last year
- Single Cell Analysis of Five'Ends☆50Updated last year
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆74Updated 2 months ago
- release version☆54Updated 2 years ago
- R implementation of MULTI-seq sample classification workflow☆62Updated last year
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated last year