KChen-lab / MEDALTLinks
Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile
☆21Updated 2 years ago
Alternatives and similar repositories for MEDALT
Users that are interested in MEDALT are comparing it to the libraries listed below
Sorting:
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Ordering gene-expression and functional events in single-cell experiments☆24Updated last year
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆18Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated this week
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- ☆50Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- ☆25Updated 2 months ago
- ☆58Updated last year
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 5 months ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- analysis script for GBM single cell RNA seq data☆21Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- ☆43Updated 4 years ago
- ☆18Updated last year
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- ☆15Updated 3 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Landscape Single Cell Entropy☆20Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆38Updated last month