dmcblab / InfoGenomeRLinks
☆10Updated last year
Alternatives and similar repositories for InfoGenomeR
Users that are interested in InfoGenomeR are comparing it to the libraries listed below
Sorting:
- Improving gene isoform quantification with miniQuant☆32Updated 3 weeks ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Updated 3 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 10 months ago
- ☆27Updated 3 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆26Updated 4 months ago
- ☆38Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆72Updated last month
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 7 months ago
- ☆37Updated 6 years ago
- ☆38Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Updated last year
- Example datasets for CNVkit (http://github.com/etal/cnvkit)☆23Updated 7 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated last year
- Structural variant merging tool☆57Updated last year
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing☆15Updated 5 months ago
- Long-read splice alignment with high accuracy☆64Updated last year
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆36Updated 6 years ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- ☆30Updated 5 years ago
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆18Updated 5 months ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- Experimental String Graph construction and processing☆26Updated 2 years ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆34Updated 2 months ago
- ☆20Updated 3 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆53Updated 11 months ago
- Code and custom scripts relevant to gnomAD-SV (Collins*, Brand*, et al., 2020)☆37Updated 5 years ago
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆25Updated last year
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 7 months ago