dmcblab / InfoGenomeRLinks
☆10Updated last year
Alternatives and similar repositories for InfoGenomeR
Users that are interested in InfoGenomeR are comparing it to the libraries listed below
Sorting:
- ☆24Updated last year
- ☆38Updated 2 years ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- ☆27Updated 3 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 9 months ago
- Reconstruction of focal amplifications with long reads☆23Updated 2 months ago
- Micro DNA identification☆23Updated 4 years ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆70Updated 3 weeks ago
- Improving gene isoform quantification with miniQuant☆31Updated 3 months ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Updated last year
- ☆38Updated last year
- FINSURF is a tool designed to analyse lists of sequences variants in the human genome.☆12Updated 3 years ago
- Structural variant merging tool☆57Updated last year
- ☆37Updated 6 years ago
- HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jo…☆70Updated 10 months ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- Clair3-RNA - a long-read small variant caller for RNA sequencing data☆37Updated 2 weeks ago
- Example datasets for CNVkit (http://github.com/etal/cnvkit)☆23Updated 7 years ago
- ☆13Updated 6 months ago
- fusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector☆23Updated 3 months ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Updated 4 years ago
- ☆20Updated 3 years ago
- ☆22Updated 5 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Updated 2 years ago
- Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing☆15Updated 4 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆26Updated 3 months ago