Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ratio calculations
☆14Sep 15, 2023Updated 2 years ago
Alternatives and similar repositories for facets2n
Users that are interested in facets2n are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- FInding REliable Variants without ArTifacts☆23Nov 18, 2022Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processing☆24Sep 18, 2023Updated 2 years ago
- Quantifying copy number signatures from absolute copy number profiles☆28Jul 23, 2025Updated 11 months ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11May 26, 2023Updated 3 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆73May 23, 2024Updated 2 years ago
- ☆11Aug 3, 2018Updated 7 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- Fast RNAseq pipeline☆10Mar 17, 2023Updated 3 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆21Mar 27, 2026Updated 3 months ago
- Crossmapped phenotype ontologies for the oncology domain☆16Jul 9, 2026Updated last week
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Allele-specific copy number estimation with whole genome sequencing☆23Nov 10, 2023Updated 2 years ago
- Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay☆14Mar 15, 2019Updated 7 years ago
- Utility functions for FACETS☆40Oct 24, 2025Updated 8 months ago
- Python program designed to reconstruct immunoglobulin gene rearrangements and oncogenic translocations from WGS, WES and capture NGS in l…☆21Jul 6, 2023Updated 3 years ago
- Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data☆19Mar 18, 2023Updated 3 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Sep 8, 2023Updated 2 years ago
- openbiox 翻译计划☆16Jun 10, 2019Updated 7 years ago
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆20Jul 6, 2026Updated 2 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- v2.x of the microassembly based somatic variant caller☆29Jun 30, 2026Updated 2 weeks ago
- AWS Quick Start Team☆24Oct 3, 2024Updated last year
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- Evolutionary frequency visualization tool of temporal data☆24Jan 25, 2022Updated 4 years ago
- Let's get started!☆15Oct 21, 2019Updated 6 years ago
- ABRA2☆97Dec 2, 2022Updated 3 years ago
- ☆12Apr 1, 2025Updated last year
- Integrative analysis of complex structural variants☆22Sep 7, 2020Updated 5 years ago
- Rust binding for WFA2-lib☆10Jun 7, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆18Dec 9, 2025Updated 7 months ago
- Code for blog post "{n} times faster than C, where n = 128"☆11Jul 20, 2023Updated 3 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Mar 7, 2020Updated 6 years ago
- ☆10May 17, 2022Updated 4 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆11Jul 10, 2026Updated last week
- A set of tools to annotate VCF files with expression and readcount data☆31Jul 12, 2026Updated last week
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 7 years ago